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Detailed information on CNT3056176


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691007Amborella trichopodaOryza sativa6.0378.4380.71280reverse complement
CNT30677956Amborella trichopodaSetaria viridis5.5142.680.86256forward
CNT30730658Amborella trichopodaCorchorus capsularis5.6233.2585.82261forward
CNT30198768Amborella trichopodaPisum sativum3.9837.3783.78185reverse complement
CNT30492881Amborella trichopodaOlea europaea3.8327.684.27178forward
CNT30191576Amborella trichopodaSecale cereale6.0371.4380.36280reverse complement
CNT30297822Amborella trichopodaTriticum aestivum6.0367.9680.36280reverse complement
CNT3082974Amborella trichopodaBrassica juncea5.6430.8284.35262reverse complement
CNT3017923Amborella trichopodaZea mays2.9548.9383.21137forward
CNT30610477Amborella trichopodaGossypium raimondii5.6238.584.29261forward
CNT30232463Amborella trichopodaAnanas comosus2.1341.9587.8899reverse complement
CNT30684722Amborella trichopodaTriticum urartu6.0326.2480.36280forward
CNT30356763Amborella trichopodaLactuca sativa4.9542.4488.26230reverse complement
CNT30319059Amborella trichopodaAsparagus officinalis6.0734.6985.46282forward
CNT30150789Amborella trichopodaBrachypodium distachyon4.1123.1280.1191forward
CNT30550344Amborella trichopodaOryza brachyantha4.1181.2881.15191reverse complement

Expression of CNT3056176

Peptides detected in this lncRNA

>peptide 1 (53 aa)
MVQMQLDLKGAFLRHCRSISRRLLYLFGLFLLHTSSFSFFFFSWLNLDFGAPK*

>peptide 2 (59 aa)
MLIVSFLFSITFTCKPWFINESIELFFGYIVSFKISGYYTFYLVMLLIYVLISFYEVFV*

>peptide 3 (64 aa)
GNLFMARNTFTRTKRAIFPHLQTPTPLYTSMISSNLHSISFPLIPLHSLSSFSKLSSCLHTFSL*

>peptide 4 (70 aa)
MTFVIENMIIIRFLSLPSSSFYPFPINWVAYMTPCSPSWSIKSHIEATSPHIFFYYFQCPLQSFHFNYTS*

>peptide 5 (30 aa)
MSSVLLILEFTLKQAHIMLYLFWMDTEGKG*

>peptide 6 (29 aa)
MLHLFVTMIFTKTKLFTLLLFDWQNPAFP*

>peptide 7 (39 aa)
REFIHGPKYFHTNQTCHFSPFTDPHSTLHFHDFIQSPFH*

>peptide 8 (34 aa)
MMLRTESHFSNFLKTALKSFSIFAPSSFLSFLFR*

>peptide 9 (47 aa)
METYMTLQLGGRFFGQDNFQVDTKRNKIIELTRKSKYPKSHFIPMYY*

>peptide 10 (42 aa)
MTMIVLTTTSLLKLIVKRKYHSKHYFFFFYKIFFDEILGILS*

>peptide 11 (31 aa)
MGFMFKVLSLSSSSIFLSLSLSLPPLRCHLE*

>peptide 12 (30 aa)
GIYSWPEILSHEPNVPFFPIYRPPLHSTLP*

>peptide 13 (34 aa)
MIRVTHDFFSHAVFESIDNLLFCMNRYYYISILS*

>peptide 14 (33 aa)
MFFVSFILYLFCFVFDPILIFVFWFSFVINLSH*

>peptide 15 (29 aa)
MRLYTLRIEINFLKDPGFCALVGCPRFFR*

Sequence

>CNT3056176
CGGGAATTTATTCATGGCCCGAAATACTTTCACACGAACCAAACGTGCCATTTTTCCCCATTTACAGACCCCCACTCCACTCTACACTTCCATGATTTCA
TCCAATCTCCATTCCATTAGCTTCCCTCTCATACCCCTCCACTCTCTCTCATCATTCAGTAAGCTCTCCTCTTGTTTACACACTTTCTCTCTCTAACCAT
TTTCCCTCCTCTGTGTGTGGGTGTGGGGCAGCTGGAGCTCCCAATCGATAGAAGACAAACTTTCACATACATTCCAAAGAGCACATAAAAGCAAATATAG
ATAGACACGCTATGGGGTTCATGTTCAAGGTGCTCTCGCTCTCTTCGTCCTCTATCTTTCTCTCTCTCTCTCTCTCTCTTCCCCCTTTGAGGTGCCATTT
GGAATGAGCAGTGTGCTCTTGATTCTTGAATTTACACTGAAACAAGCTCATATTATGCTTTACTTGTTTTGGATGGATACAGAGGGAAAAGGTTAGCTTT
TTGCTCTTCTGCAAATCTCCAATGCTCCATCTATTTGTAACCATGATCTTCACCAAAACAAAATTATTTACTTTATTGCTATTTGATTGGCAAAACCCTG
CATTTCCCTAAATTTTATACTGCCCATTTCTTTCTGTGCTTTTTTTTTTCTTGGTGGAAAAGGAAAGTGTTCAAGACTGTGATACTCTTTTTAATATTTT
GTCCTTCTGACTCTCTATTTTGAAGGATCTGCCTTTTCAAAGGCCAAGTAAGTTCCTTCCCTCCTTTGCTTTGTTTTAATGTAATGAAATTAGGGATATG
GAGATGGAGATGAGGTGCTTGAAAGAATTTGTAAACAGAAGATTGAGAGATTTGGGGAGTCTAAGTACAGTAAGATAAAACTATAGGAGGTTATTGATCC
CTATGTTCTTAAAGGTGGATTTTATTATTATTATTATTCTTTTGAATCCTAGGATATGATATTGTACTTTGGCAAGTATAAAATCTATTTGTTGATCCAT
ACATTCTGGTTTTTGTTTACTTAAAAGTGTCAAAATATGAAAGTGGGGTTCTTTTCACATGGTTCAAATGCAACTGGATCTAAAAGGTGCTTTTCTGCGA
CATTGCCGTAGCATCTCCAGGCGTTTATTATATTTATTTGGGTTATTCCTTTTGCATACTTCTTCTTTTTCTTTTTTCTTTTTTTCCTGGTTGAATTTGG
ACTTTGGAGCACCAAAATAGCCTTGTCATTTACATGGAATGATGCTTCGAACTGAATCGCATTTTTCTAATTTCTTAAAGACTGCCCTGAAAAGTTTTTC
CATATTTGCTCCTTCTTCCTTCCTGTCGTTTTTGTTTAGGTAAAGGAAAATTATTTCATAACTCAGCTGGTGCAAGAGCCGGCTGACTTACAAACGTCCT
GATGGATGCTATATAAATTTCATTGTCCATAAATAAGATATGGAAGGTGCATAAAAAAAATACTAAAAATTATATTTTTAATTTTAAAAGTTTATTTATT
TTTTGTATTTATGATCATCTTGGCCTAGATGATGAATCTCCAAAAAGCAATTCGAAAAAAAAATCATCTATAATAAATTTTAATGAGGGGCTGCATATGT
ACACATGGGTCAGCCGACTCATAGAAACCGCATCCATAGGTAACTATGACATTCGTTATTGAAAATATGATCATTATAAGATTTCTATCATTACCTTCAT
CATCATTTTACCCTTTTCCAATTAATTGGGTCGCTTACATGACTCCTTGTTCTCCATCCTGGTCTATTAAAAGTCATATCGAGGCTACAAGTCCTCATAT
CTTTTTTTATTACTTTCAATGCCCGTTGCAGTCATTCCACTTTAACTACACCTCCTAACAGGTTAGTTGGTACCACACATGGCCAGCCTATCTAAGTCTA
CTCTCTCTCATTTTATCGTCTATTGGTGTCATGTTTAAATTCTCTCGAATAGATTCATTTTGAATTATATTCCTTCTTGTTTTGCCACTCATCTATCTCA
ATATCTTCATCTATGCTACACTCATTTTATGGATATATTATTTTTTTGTCTGCCCTCATTAAAAGATTTCTATAAATTTTTTTTTTGGGTGGTTTGGCAG
TCAGATTGAATATTGGGACATATTGGGACCTACTGCTAATATACGAAAAAGAAAAAAAAAATAGTTATGCAACAACATTTCATTGGCGATGAGAAAATTT
CAAGAATTTGAGTTTTAGTGAGATTTCTAAGGGAAGAAATGGTGGGGATTTTTCTTTAGAATTTATTGCCCCAACATTCCCGATATGTTAATTGTTTCCT
TTCTGTTTTCTATAACGTTCACATGTAAGCCTTGGTTTATTAATGAGTCCATTGAGCTTTTTTTTGGTTATATTGTAAGTTTTAAAATTTCTGGTTACTA
TACATTTTACTTAGTTATGCTGCTAATTTATGTTTTAATTTCATTTTATGAAGTTTTTGTATGACTGCTCGAACTGCAGTTTTTATGTTGTGCTGATATC
CTCATGGAGACATATATGACTCTGCAACTCGGTGGCAGATTCTTTGGCCAAGACAATTTTCAAGTTGACACAAAAAGAAACAAAATAATTGAACTTACTC
GAAAGTCTAAATATCCTAAAAGTCATTTCATTCCGATGTATTATTAAGCTAAAACCTAATAGACCCTGGGGACTGCGTCCCGGTTAAAGGGTTCCGGTTT
CCCCCTGTCGGAGCTTTGGGGCAGAAGCTCCTACTCAAAAGTCTAGTAGACCTATTGGCGAAATTTTGAGACAAGAGACAATTGCTTTGAACTTTTGAGA
GTTTTAAATATAATTGTAGTATTGTATTAGTGACGAACCACGTAAATCTTAATGTTTTTTGTTAGTTTTATTTTATATCTGTTTTGCTTTGTGTTTGATC
CTATACTTATTTTTGTTTTTTGGTTTTCCTTTGTCATCAACCTATCTCATTAGGATTTTTTTCACCACCTTCTATTGGTCATATCCCAGAGAAGGTTAGG
GTTTTTTCACAGCTCCTTCTATTGGTATATCCCCAAGAACGAGTGAAGCCAGTTGGTAGAAACATCCACCGCGACCAGTGATGAGGTATTCATAACATTG
TATAATCCATAGCTCCCTATTATCTGAAAGGGAAATGTTTATCTCTGACCCCAATAACATATAAGTTATATGTAACCCCACTTTTTAGCCTTCGATCTGA
ATTAAATGACTATGATTGTTCTTACCACAACATCACTTTTAAAACTCATTGTCAAAAGAAAGTATCACTCTAAACACTATTTTTTTTTTTTTTACAAAAT
ATTTTTTGATGAAATTTTGGGCATCCTATCATAAAATTAGGGAAAATCTGGAAAAAATAAATTTTTTTTTTAAAAAAAATAAATGACCAAAATGCCTTTG
CAATTTTAGAGGTATTCAGGTAATTTTTCATCATCGGAAATATTGTTTTTATTATTCTTATCATGCGTGCTCCTGTCGGATTTATGCATGCCCCAAATTT
TGCTTCAAAATTAATTGTAGAAAAAAAATAAAAAGTGAAAAAACTATGAGGCGTCTGATCAAGATTTGATGGTTAAGAGCTAGCTTGTGATATTCTGACT
CAAGCCATCTCAGCCATCCACTGACGATTGAGACCAAGGGTCACATATATTATATATGTGGGAGGGATCACATAGAAGGTTTTCCCTTAAAGAAAATGCA
TATGACTTAAATTTACAAAGGATAGGGACTTGAAGGAGTTTGCTCCTGTAGAGCCAAATGTTTAAAATAGTACTCTGCTCAGGACTCCCCCCGAGTCTCT
AATTTTTTAAAGAAATTAGTAATATCTTTATTTAAATTTCACCGGTTTGATTCTGGACTTCTTTGAGTCAGACCAGGTGACTCGGGCTAGGCAAGTCCCA
ACCGGAACCTGTCTTTAAACACTAGAAATATCTATTATCGGGCAATGCAAAAATGGTAGTTGCGGCCAAAATGTCCTTCTCAACATTCATATTCCATTGA
AACGAGTGAGAAGTCATCCATAAAATAAAAACAACAAAAAGAACATTCATATTCCATTGAAACGAGTGAGAAGTCATCCATAAAATAAAAACAGCAAAAA
GGAAAAAGTTTATGTAAGGTCGCAACCTTCTATTATAAACATAAGAGTGATTCAAAGTTGGGGAACCTTCCATTTGATCATCTCGACTTCGAAATGTATG
GTATAAAGAGAAATAAAATTTTTCGTCACAAAAATAGTTTATCTTGTAACAAGTCATCTTGACCATTTATTTTCAAGATTTTAAAAGTGTTTATAGATCT
ACTTAATCTGTACCAACTTTTATGATTAGAGTTACACATGATTTTTTTAGCCATGCAGTGTTTGAATCAATAGATAACCTTTTGTTTTGTATGAATCGAT
ATTATTACATTTCAATTCTTTCCTGATATCTCTCAAGGAAAATGCCATATTGAATCCCAAATTGATGGGTTAGTGTGAGCTTATCCATGCGGTTGTACAC
TCTACGAATAGAAATCAATTTTCTGAAAGATCCTGGCTTTTGTGCTTTGGTTGGTTGTCCGAGATTCTTTCGATGACCTATGTTGAAGCAATATCTATAT
GATCCGATCGGTTAGGTAAGACCCACGGTAGCAACGAAACCGGGG