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Detailed information on CNT30561659


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30718598Actinidia chinensisMalus domestica golden21.0831.6685.3782forward

Expression of CNT30561659

Peptides detected in this lncRNA

>peptide 1 (35 aa)
RTLVEFLKIFCYGLDTVVVLVFGGNKTHKHNHQVF*

>peptide 2 (49 aa)
MTSTSISSITKMPSSSLICLFVRGNCGLSGAIGAHHLFDTWSQRRLIPP*

Sequence

>CNT30561659
CTCGGACTCTTGTGGAATTCTTGAAGATTTTTTGCTATGGATTGGATACAGTCGTTGTGTTGGTCTTTGGAGGCAACAAGACTCATAAGCACAACCATCA
AGTTTTTTGAGTCCTAGACATCCCCTAAGCGTAAGCTCGCTGTCTATGACTAGTACGAGTATTAGTAGCATAACAAAAATGCCTTCCTCGTCATTAATAT
GTTTGTTTGTTCGTGGTAATTGTGGTCTCTCGGGGGCAATAGGTGCACACCACCTGTTCGATACTTGGTCTCAAAGACGCTTGATCCCTCCTTGAAAAAG
AAATGGAATTTTCAGTTTCAGAATCAGGTTTGCACAATAGGCTTCAATAAATTTGTTTGGTTGATTGTTTTCAGGAATTTTCAAAAAAG