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Detailed information on CNT30561449


BLAST search results

BLAST vs Swiss-Prot:
sp|Q43467|EFTU1_SOYBN, E-value = 1e-84

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691003Actinidia chinensisOryza sativa48.1427.7490.74324forward
CNT30671090Actinidia chinensisSetaria viridis26.8970.1690.61181forward
CNT30548919Actinidia chinensisIpomoea triloba34.4747.5485.78232forward
CNT30512755Actinidia chinensisJuglans regia24.6746.8985.54166forward
CNT30525171Actinidia chinensisPhaseolus vulgaris11.8923.693.7580forward
CNT30197940Actinidia chinensisPisum sativum23.1832.9181.41156forward
CNT30303025Actinidia chinensisTriticum aestivum11.4428.192.2177forward
CNT30237230Actinidia chinensisBrassica oleracea49.7839.8883.88335forward
CNT30263786Actinidia chinensisBrassica rapa35.8153.3286.31241forward
CNT30364686Actinidia chinensisSorghum bicolor24.0720.9390.12162forward
CNT30154218Actinidia chinensisPrunus persica1121.5789.1974forward
CNT30573737Actinidia chinensisVitis vinifera20.6544.9884.89139forward
CNT30100297Actinidia chinensisOryza rufipogon48.1424.5690.74324forward
CNT30575294Actinidia chinensisOryza barthii14.8646.5198100forward

Expression of CNT30561449

Peptides detected in this lncRNA

>peptide 1 (51 aa)
MVMPRARSSGAASISSYFLGALLPREARAMVSAAVRVVLPWSTCPMVPMLT*

>peptide 2 (65 aa)
MVLGRRVGFESEAVVVSEAEEEGEGEEYGCMKFDEVVALATEIAMVGVGLQATERERERESHRVD*

>peptide 3 (34 aa)
MKLLLLLLKLPWSELDCRPQRERERERVTEWIRD*

>peptide 4 (50 aa)
CLLRKTTMLGTPTCLAKRMCSLVWGMGPSAPETTRMAPSIWAAPVIMFLT*

Sequence

>CNT30561449
TGCTTGTTGAGGAAAACGACCATGTTGGGGACACCGACCTGTTTGGCTAAGAGAATGTGTTCTTTGGTCTGGGGCATGGGGCCGTCGGCGCCGGAGACGA
CGAGGATGGCGCCGTCCATCTGGGCGGCTCCAGTGATCATGTTCTTGACGTAGTCAGCGTGGCCGGGGCAGTCGACGTGGGCGTAGTGGCGGCTCTCGGT
CTCGTACTCGACGGTGGCGGTGTTGATGGTGATGCCGCGGGCGCGCTCCTCCGGGGCGGCGTCAATCTCGTCGTACTTCTTGGGGGCGCTGTTGCCGAGG
GAGGCCAGGGCCATGGTCAGCGCCGCCGTGAGGGTGGTCTTGCCGTGGTCCACGTGCCCGATGGTGCCAATGTTGACGTGAGGCTTTTTGCGCTCGAACT
TGCCGCGCGCCGCCCGGACGGTGAAGGGGCCGCGGCGGCGGGCGGAGGGGAGTGTTAATTTGATGGTTTTGGGGCGGAGAGTGGGTTTTGAGAGTGAAGC
GGTGGTGGTGAGTGAGGCGGAGGAGGAGGGGGAAGGTGAAGAATATGGGTGCATGAAGTTTGATGAAGTTGTTGCTCTTGCTACTGAAATTGCCATGGTC
GGAGTTGGATTGCAGGCCACAGAGAGAGAGAGAGAGAGAGAGAGTCACAGAGTGGATTAGGGATTGAAGGGAT