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Detailed information on CNT30561419


BLAST search results

BLAST vs Swiss-Prot:
sp|Q39817|CALX_SOYBN, E-value = 1e-95

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30709122Actinidia chinensisGlycine max21.8739.284.06138forward
CNT30164689Actinidia chinensisPistacia vera74.0184.9183.08467forward
CNT30397803Actinidia chinensisTriticum turgidum23.4518.8584.46148forward
CNT30144977Actinidia chinensisMedicago truncatula89.8661.5680.25567forward
CNT30120413Actinidia chinensisCitrus clementina92.7172.3183.76585forward
CNT30333676Actinidia chinensisCynara cardunculus81.7710079.07516forward
CNT30725707Actinidia chinensisLupinus angustifolius49.2956.4483.6311forward

Expression of CNT30561419

Peptides detected in this lncRNA

>peptide 1 (47 aa)
QAVSLYDSATFSSPAIKTLSNKMPSCIVQISMPMAAIGSKSGVSSSK*

>peptide 2 (36 aa)
KQFLCMIPQLSHHQLSKRCQTKCHLALSRSRCQWQQ*

>peptide 3 (40 aa)
MVLAGISAGSKSSEERKLAFFFSSPSMRMRNSLLGFRMAV*

Sequence

>CNT30561419
CAAGCAGTTTCTCTGTATGATTCCGCAACTTTCTCATCACCAGCTATCAAAACGTTGTCAAACAAAATGCCATCTTGCATTGTCCAGATCTCGATGCCAA
TGGCAGCAATAGGCTCAAAGTCAGGCGTGTCAAGTTCGAAATAGCTGGGGTTTGGAATTTCCTGAGGCTTCCAGATACCCTTGTAATTGGGATTGTCAAT
TTGCGGGGCGAACCATTTTCCCTTGTAAGCTGGATTGGTCTTCATTGGCCTCTTCCAAACGCCACAACCAGGAGCAGTCTCACACTTCGGGTTGTCAATT
TTCGGAGACTCCCATTCGCCATCCTCATCATCATCCCAATCTTCTGGTTTCTTATCATCAGGGTCAGGAATGGTCTTGGCAGGAATAAGTGCGGGCTCGA
AGTCCTCAGAAGAGAGGAAATTGGCCTTCTTCTTCTCTTCACCGTCTATGAGGATGCGCAACTCATTGCTAGGCTTCAGAATGGCAGTGTAGACATGGGT
TAGCTTGTCAGATGGCACAGAGGGTGGGTACTTGAGATGGTGTTCAACGTACTCTCCACTCTTGGGGTTCTTATGCTTTAGAATGAAGTGAACCTTGTTT
GTGCCACCACATTTATCGGGTCCAAACATGA