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Detailed information on CNT30561181


BLAST search results

BLAST vs Swiss-Prot:
sp|P14009|14KD_DAUCA, E-value = 6e-28

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3095919Actinidia chinensisSolanum tuberosum11.2523.1185.7198forward
CNT30623993Actinidia chinensisDaucus carota10.136.3684.0988forward
CNT30356461Actinidia chinensisLactuca sativa12.1722.884.91106forward

Expression of CNT30561181

Peptides detected in this lncRNA

>peptide 1 (79 aa)
MAVQRQTAASRSASPSMREQQGVFGGVPTTTLTKLLSTSAQTPSFRVSLGQVALVGGVGGDGVGALGVLVVVGMGHGGR*

>peptide 2 (51 aa)
MRKKARSLIHFNTNYWRSSKVRETLLETLKQLNQLLFKNTGSHLGHSFHNS*

Sequence

>CNT30561181
ATTGAGAGAAACTTCTTCAGAAGAGTAGTAAGAAGATCGAGGAGAAAATAATAAAATATCCGAAATTACAAAAGTAACCACAAAATTTCACATAATATCA
AATTTTATTGTTGCAACAAAGCATTGGAATACTCACGGTCACTTTAAAAGAGAAGTATACAGTAGTTCTAGATGAGAAAGAAGGCAAGAAGCCTTATACA
TTTCAACACAAATTATTGGAGAAGTTCAAAAGTAAGAGAGACACTTTTAGAAACATTAAAGCAGCTTAATCAACTTTTGTTTAAGAACACTGGAAGCCAC
TTGGGACACTCTTTCCACAATAGTTGAGAAGAAGGCTCAAAGAAACGGGAACATTAAGGTTAATCCCCAAGACATTGGCCTTAATGGCAGTGCAAAGGCA
AACTGCAGCTTCAAGGTCAGCTAGTCCCTCAATGAGAGAGCAACAAGGGGTCTTTGGAGGGGTACCAACCACAACGTTGACCAAACTCTTGAGCACATCG
GCACAAACACCTAGTTTTAGGGTGTCTTTAGGGCAAGTGGCCTTGGTAGGTGGGGTTGGTGGTGATGGGGTGGGTGCTTTGGGGGTTTTGGTGGTGGTGG
GCATGGGACACGGTGGGAGGTGACTAGGGTGAAGAACAGGAGGTTGAGAGAGAGGAGGAGGGTTGTGGATGCAATAGCCTTTGAAGCCATCTCAAATGAC
ACAAGTTTGGTTTGTGAAGTGGGTTGCTGATGGAAACGGTGGTGTGGGCTAGGCTTTTATAGGTGGAAGTGGCTTATTTTTTTCTCATTGTTTTTTGTAA
ATGAAAATGGAGAAACACAAATGCTATAAACCCAGAACAAATATCAATAATAGTTATCCAGAAAATTAACT