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Detailed information on CNT30560987


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9FK62|SAU24_ARATH, E-value = 1e-34

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30315163Actinidia chinensisCorylus avellana33.4628.184.71170forward
CNT30381249Actinidia chinensisManihot esculenta28.3543.2485.42144forward
CNT3044405Actinidia chinensisPrunus dulcis37.626.4284.29191forward
CNT3090109Actinidia chinensisSolanum tuberosum18.922.9187.596forward
CNT30652897Actinidia chinensisRosa chinensis34.0627.0384.97173forward
CNT30716413Actinidia chinensisMalus domestica golden32.6830.0784.34166forward
CNT30623625Actinidia chinensisDaucus carota28.7424.4185.62146forward
CNT30620093Actinidia chinensisCajanus cajan34.2518.0985.06174forward

Expression of CNT30560987

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MNNPRQTNSHCFQWVYPREQNKKGLKDFRNK*

Sequence

>CNT30560987
CTTTAAATCTGAGAGAATGACATTAAATGACATTTTCTTTACAAAATTGTGCTAGCTAAAGTATGGTATCAAGTGTCCCCTAGCATTGATCATAATCCCC
CCAACCGAGAAGTGAGATCAATGAAGATGTTTTCACTGCAGGGAATGGTAAGACCGCCCATTGGATGATCAAAACCAAATTCTTCCTCAGCTTGACATAA
CAAGTCTTGGAATGAAGGCTGGTTCAAGTACGATATTGGAACTACAAATCGCTTCTTTTCACTCTCTCCAACATAAACTGCAAAATAACCCTTAGGAACA
TCTACCGTTGCTAAAAGCGCTTTCCTTGTTGCCGATGAAGACCGTCTAATGATTTGTTTGGCATGAATAATCCGAGGCAAACGAATAGCCATTGTTTTCA
ATGGGTATATCCCCGTGAACAAAACAAGAAAGGTTTAAAGGATTTTAGGAACAAGTGAAAGCTGTGTAAGTGAAGATTTTGAAGCTTGTGTTGAATATAG
ACCAACTG