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Detailed information on CNT3056094


BLAST search results

BLAST vs Swiss-Prot:
sp|P93276|M030_ARATH, E-value = 9e-18

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30511493Amborella trichopodaSolanum lycopersicum13.131.6695.41283reverse complement
CNT30550626Amborella trichopodaOryza brachyantha13.98103.0787.09302reverse complement

Expression of CNT3056094

Peptides detected in this lncRNA

>peptide 1 (55 aa)
MVSMARGRALNGLGWPPKSLTNPRETPKTGLDRLYGQTLWVLRSKVERETAQIVH*

Sequence

>CNT3056094
CTTGCTTCTTGCTTTCGAGCTGTAGTTTGTTGTCTTTGACAAGACTTGGCTTGCCCTCCTAGCTTTTGCTTTGCAACAGCAAAAATCCCAGCCATTAGAC
CTTGCTTGCATCGAGATTATGTTGTGTTCAGTGTACCCAATGCATTTGATGGATGCCCGAGCATTGAGAAGGAAGGACGCTTGAAAAGGCAAAAGGCCAT
GGGGAGATATCGTCTGTGATCCATGGATCATCTGATCGGGAAACCGTATCCAACGTGGCTAGTCTGCGCTCTTAGGACTTTGAAAACATAGCGAACTGAA
ACATCTGAGTAGCTAAAGGAAGGGAAATCAACCGAGACCCCGTTAGTATCGGCGAGCGAGAGCGGATTGGGGCTTTGAAGAAAAAGAAACACGAAGCTTA
CCACGAAGCTTCGCGCTAGCAAAGCAAAGCAATTCAATCTTCTTTCATCCTCGAAGCGAAACGAAGCAAAGGTGCGGAGCCGCTTAACCTCGTTCCTCTT
GCTTCGCTCATGGCTCGCTCAGTGCTTACGCACTTCGCTTCCTTTCCTATTAGGCTCGTTTCGTAGAACTGCACTCGTTTAAACGTAACTCGGGCCTAAC
AAACTAGTTTTCGTAGGCTCCTATTAAGCTCGTGTAACTGGTTCTCATTGGTTTCATTCGATTTGTTGTGGATTGGATGATGGAAAAACCGTTGGTCCGG
GAATTGTGAAAAGGTTGGAAGATCTGACCCAAGAAGGTGATAGTAGATTAGTTCCCATGGTTCGATCCTTCCCAGTAAAACGCAGCGTGTTCGAATTCTG
ATCGCTTTTACAAGAGAAAGGGGGACCACTCTCTAAGCCTAAGTCTTCCTCAATGACCGATTGTGTACAAGTACCGTGAGGGAAAGGTGAAAAGAACCCT
ATTTAGGGAGTGCAATAGAGAACCTGAGATCCAATGCGAACAATCAGTCGAAGGAGCAGAGCTTAGAGCCAAACGGCGGGTGCACTCAATCTAACGGTGT
ACCTTTCACATGATGGGTCAGCGAGGAAATGGGAACAGTGGCTTAAGCCATTAGGTGCGCTTTCCAAATGTTGAATCTTTTAGTTTTTCCTATTTGACCT
GAAACTGATCAATCTAGCCATGCGCAGGTTGAAGAGAGCTCTAACAAGCCTTAGAGGACCGAACCCACGTATGTGGAAAAATATGGGGATGACTTGTGGC
TAGGGGTGAAAGGCCAACCAAGATCAGATATAGCTGGTTTTTCACGAAATCTATTTCAGTAGAGCGTATGGTGTCGATGGCCCGAGGTAGAGCACTCAAT
GGGCTAGGGTGGCCCCCAAAAAGCTTGACCAACCCCAGGGAAACTCCGAAGACAGGCCTAGATCGTTTGTACGGACAGACTCTTTGGGTGCTAAGATCTA
AAGTCGAGAGGGAAACAGCCCAGATCGTACACTAAGGTCCCTAAGAAATCACTTAGTGGAAAAGGAAGTGATCGAGCAATGACAATCAGGAGGTGGGCTT
GGAAGCAGCCATCCTTTGAAGAAAGCGTAATAGCTCACTGGTCTAGCTCCATGGCATAGAAAATGTATCAGGGCTCAAGTGATTCATCGAAGCAATGAGA
CCTTGAAAGCATTTTCAAGTGTCAGTAGCAGGACGTTCTGTCAATCGGGGAAGGTTTTTGGTGACAACACCTGGAGATATCAAAAGTGAGAATGCTGACA
TGACTAACGAGAAATCCTGTGAAAAATGTGATCACCTGCCAGTTTAAGGCTTTCTGCGTTCAGTCAATCTATGCAGAGTGAATCGGTCCCTAAGGAAGCC
CCTAATCTGTCGTCCGATGGGTACACGCGAGTGACGAAGTTTCCTTGACTGCTGAACCATGTCTGTCTGTTGGAGCGAATTGGATGATCGGGCCGAGGGC
TGCCCCCTCTTCCCCTTGCTCTCCTTTCCCTAAGATGAACCTTGAGTCAGAAAAGCCTTTCTGACTCAGACGTGCCTGGCCCTCTAAGCTACTGGCGCTT
CAAAAGGTGAAACTCTCATCGTAGTTTGGCGACCTAAGAACAAAGAACTCAGCTGTTCAGGCAGTGGCAAGGCAAGCAAGGAGCAAAGCCAGTGGTGGCA
ATGTCAAAACACTCGTTGTTGAGGGTGGGTTTGCTTTTAAAAAAAAGCGATTGTTGAAGA