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Detailed information on CNT30560770


BLAST search results

BLAST vs Swiss-Prot:
sp|Q08733|PIP13_ARATH, E-value = 4e-72

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3085870Actinidia chinensisVigna radiata14.0620.7389.0191forward
CNT30613102Actinidia chinensisArabis alpina8.6621.5487.556forward

Expression of CNT30560770

Peptides detected in this lncRNA

>peptide 1 (46 aa)
MVFVEDDGGPETSGGINAGSGDGDGGQMNQEDSKSDWPHHPTSGMG*

Sequence

>CNT30560770
ATTGGCTAATATTTATTAGAATATCGGTATTGGAAGGCCAAAATCCCGATACCTAGCGGCCACGTGTCGACCAATATTTAAAAGCTTGATTAGCACTCCA
TCTATCATCAAGGAACATTAACATTGGCATCAAAAAAAATCTGTTGTGAAAAGACTCACTTGGTCATCCCATGCATGGTCTTTGTTGAAGATGATGGCGG
CCCCGAGACTTCGGGCGGGATTAATGCCGGTTCCGGTGATGGGGATGGTGGCCAAATGAACCAAGAAGACAGCAAATCCGATTGGCCCCACCACCCAACA
TCTGGTATGGGGTAGGCTGGAACCCCTTGACCACACCAGCACCACAGATGGCTCCAAGGCACTGCATCACTATATAGAAGATTGCCCTGGTTAGGGACAG
CTTCCTTGCCAGAAACAAACCAAAGGCCCAAGCAATCCCCTGAATACCCACAGTGGCACACTTGCTAGGTGACCTGGAAACACCCATTACAGTCAAAATG
GTGATGTACAAGAATAAGAAAGTGGCCACGAACTCGGCAATCCCAGCCCTGTAGAAGGACCATGACTTGAGCTCCCCTGGCTCGAACAGGGGAGCTGGGG
GTGGCTCCTTGTAGTCCTTGTCTGTCTGAGCCGATGTGCCCAATGGC