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Detailed information on CNT30560633


BLAST search results

BLAST vs Swiss-Prot:
sp|Q49KW6|RPOA_EUCGG, E-value = 4e-39

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30618863Actinidia chinensisSesamum indicum28.83.1190.41146forward
CNT30591703Actinidia chinensisMusa acuminata27.8116.0688.65141forward
CNT30228020Actinidia chinensisAnanas comosus30.3711.1487.66154forward
CNT30330242Actinidia chinensisDioscorea rotundata30.3760.6386.36154forward

Expression of CNT30560633

Peptides detected in this lncRNA

>peptide 1 (42 aa)
NSRGILSKYVIWVLRKASGGKYKLSKKACLIFFEVLESIKVF*

Sequence

>CNT30560633
CAACTCCAGGGGGATACTTAGCAAATACGTGATATGGGTATTGAGAAAAGCAAGTGGGGGCAAATACAAACTCTCGAAGAAAGCCTGCCTCATATTTTTT
GAAGTGTTAGAATCAATAAAAGTATTCTGAATTGTCCCATATCTGTTTTACATCTTCTATGCGAAAATGCTCAATTTTCATAAGATCTTCTTGAGTCTTA
TTCAAAAGATCCAATAATGTATATATATTGGATCTTTTGAGGCAATTATAGATTCTGGGAGAAAATTCGAATTGGTCAATAAAAATGGATCTCAATTCCA
ATGCTATTTTTGTTTTGTTTTTACTTAGTTTAGCCAATTTATCATGAAAGGTAAAAAGAGGTAAAGTAACCTTGTGTTGATTGTGATCTAAATAGAAGTT
TTCTAATTCATATGAATGATTCAAATTAACTTAAATGTATGGGTCACGTAATATTGTAATTCTAAACCAACTATTTTAAATTTGCCAAAACTTTTCTTGA
TCTAATT