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Detailed information on CNT30560172


BLAST search results

BLAST vs Swiss-Prot:
sp|P14278|CB24_SOLLC, E-value = 6e-98

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30317234Actinidia chinensisCorylus avellana23.2236.2288.29222forward
CNT30723501Actinidia chinensisLupinus angustifolius24.7921.9484.39237forward

Expression of CNT30560172

Peptides detected in this lncRNA

>peptide 1 (30 aa)
AIEIAQRPLPVMFFYLTCMPWLVSGTKFHR*

>peptide 2 (38 aa)
MPLGHQPVQVGQRLLQGRSCRALHQVGLRQSGIPRRSP*

>peptide 3 (31 aa)
MYAMAGQWDKVSQVREMMKKRNQERSEMQFY*

>peptide 4 (43 aa)
MAWTKNPNIENIASRPFLISFTFNSANASGSSASPSGSKAPPG*

Sequence

>CNT30560172
GTGCCATTGAGATTGCTCAGAGACCCTTGCCTGTTATGTTCTTCTATCTAACATGTATGCCATGGCTGGTCAGTGGGACAAAGTTTCACAGGTAAGAGAA
ATGATGAAGAAAAGGAATCAAGAAAGATCCGAGATGCAGTTCTATTGAGCATAAAGGTTTGCTTCATGAGTTCGTTGTGGGTGAGATAAGTCACATCAAC
AAACTGAAGAGATATATTCTAAAATGAGTGAGATGCAAAATAGATTGTAAAACATGGGACATATTCCTGCCACAAGCCAAGTTTTGTTGTGTGTTGAAGG
GGAGAAAGCTTAATTGGAAATCCATAGTGAGAGGTTGGCTATTGCTTTTTGTCTCAGTAGTGTGAGGAAGATGCAAAATTATAGTGACAATAAGAGCTGA
AAACTCAAGTGACAATATAGATCTTAGATAAGCAGTCTCTGCAAGTAATATTACATCATTACTGATTCCATCCACAGGCAGAAAAAGTCAATCACACCAA
GAAGCTTTAGTAATGTTTCAGCTCACTCTTCATTTTCCGGGTACGAAGTTAGTGGCATAAGCCCATGCATTGTTGGCCACAGGATCAGCAAGGTGGTCAG
AAAGGTTCTCAATTGGACCCTTTCCAGTAACGATGGCCTGGACGAAGAATCCGAACATCGAAAACATTGCTAGCCGGCCGTTCTTGATCTCCTTCACCTT
CAACTCTGCAAATGCCTCTGGGTCATCAGCCAGTCCAAGTGGGTCAAAGGCTCCTCCAGGGTAGATCTTGTCGAGCCCTTCACCAAGTGGGCCTCCGCCA
ATCCGGTATCCCTCGACGAAGCCCATGAGCACCACTTGGCAAGCCCAGATCGCGAGGATGCTCTGGGCGTGGACGAGATTAGGGTTGCCGAGGTAATCAA
GGCCACCTTCGGAGAATATTTGGGATCCGGCCTTGAACCAAACTGCCTCGCCGAAC