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Detailed information on CNT30559885


BLAST search results

BLAST vs Swiss-Prot:
sp|P20364|TBB1_DAUCA, E-value = 4e-63

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30534291Actinidia chinensisEucalyptus grandis32.4426.6987.65170forward
CNT30727252Actinidia chinensisCorchorus capsularis56.1139.2586.05294forward
CNT30486254Actinidia chinensisOlea europaea34.1646.7484.92179forward
CNT3015387Actinidia chinensisZea mays50.1916.2586.31263forward
CNT3041960Actinidia chinensisChlamydomonas reinhardtii35.6954.8485.56187forward
CNT3054138Actinidia chinensisAmborella trichopoda33.7834.9184.75177forward
CNT3022498Actinidia chinensisPopulus trichocarpa42.5640.7787223forward
CNT30119164Actinidia chinensisCitrus clementina61.0768.6786.25320forward
CNT30150001Actinidia chinensisBrachypodium distachyon19.0831.6586100forward
CNT30116105Actinidia chinensisOryza nivara27.119.2487.32142forward
CNT3050576Actinidia chinensisCucumis sativus52.2954.4781.39274forward

Expression of CNT30559885

Peptides detected in this lncRNA

>peptide 1 (75 aa)
MLLSASVNSISSIPSPVYQCKKALRLNMAVNCSLTLLNISWIEVEFPTNVEAIFRPVGGISQTLDFTLFGIHSTK*

>peptide 2 (35 aa)
MWKPSSDQLGEYHKRLTSHCLGSTPQNRMSSCSAH*

Sequence

>CNT30559885
CTAGGCTTGGGATTCTGATGCCACACTGGTCAAATGCTCTTCTAATATCTCTCTCTCTCTGTCTCCCCCCCTGAGTTCAGAATTGGGTTTTTGAAGCAAT
CAAAACTCTAAAAGTATGTATATGCAAATGAGGAGGCTATTTTTTGGACACTGAGAAGCTCGTAAAATTAAATAAGCCCTCATAGTTCTCTTCCGCGCCA
TCCTCATACTCTCCCTCCTCGTCGGCAGTGGCATCCTGGTACTGCTGGTATTCCGCCACCAAGTCATTCATGTTGCTCTCTGCCTCCGTGAACTCCATCT
CGTCCATCCCCTCCCCGGTGTACCAGTGCAAGAAGGCCTTGCGCCTGAACATGGCCGTGAACTGCTCGCTCACTCTCCTGAACATCTCTTGGATCGAAGT
GGAGTTCCCCACAAATGTGGAAGCCATCTTCAGACCAGTTGGGGGAATATCACAAACGCTTGACTTCACATTGTTTGGGATCCACTCCACAAAATAGGAT
GAGTTCTTGTTCTGCACATTGATC