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Detailed information on CNT30559435


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30317353Actinidia chinensisCorylus avellana25.26.9587.193forward
CNT30378086Actinidia chinensisArabidopsis thaliana25.472.5789.3694forward
CNT30270425Actinidia chinensisChenopodium quinoa20.65.1890.7976forward
CNT30631505Actinidia chinensisVigna unguiculata25.212.5387.193forward
CNT30486061Actinidia chinensisOlea europaea21.684.0191.2580forward
CNT30167505Actinidia chinensisPistacia vera25.25.5288.1793forward
CNT3085860Actinidia chinensisVigna radiata25.478.0887.2394forward
CNT3079114Actinidia chinensisBrassica juncea25.473.0388.394forward
CNT30410657Actinidia chinensisPapaver somniferum24.664.285.7191forward

Expression of CNT30559435

Peptides detected in this lncRNA

>peptide 1 (31 aa)
IKALVVFQSNGTVILCLRFDIYIYQKYVELL*

>peptide 2 (55 aa)
MVSFLAYMFPCLKLCVLTALSVISLTLSPCKKFYKLLVTYVQFIYYTIIFLLLCV*

Sequence

>CNT30559435
AATCAAAGCACTAGTAGTGTTCCAATCTAATGGAACAGTAATCTTGTGCTTGAGATTTGATATATATATATACCAAAAATATGTGGAATTGCTATAGTAT
TAGTATAGGAGTTGTGTGGTGTAATAATAGAGTACTACTACTTTCGTTTTGAGGTGACAGAAGAGAGTGAGCACACATGGTGTCTTTTCTTGCATATATG
TTTCCATGCTTGAAGCTATGCGTGCTCACTGCTCTATCTGTCATCTCTCTCACTCTCTCTCCATGTAAAAAATTTTATAAACTTTTAGTAACGTATGTGC
AGTTTATATACTATACTATCATTTTCCTTCTTCTATGCGTTTAGCATCTGTACATGCCTTTCTCGTGGG