Detailed information on CNT30559395


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30532211Actinidia chinensisEucalyptus grandis9.225.1188.41164forward
CNT3085348Actinidia chinensisVigna radiata8.9864.5284.38160reverse complement
CNT30239222Actinidia chinensisBrassica oleracea9.229.0882.32164reverse complement

Expression of CNT30559395

Peptides detected in this lncRNA

>peptide 1 (45 aa)
HAILLSHANSLSLLKLLSPNPPKSLSLSRTNPSSSFFYFLLAGAN*

>peptide 2 (46 aa)
MLYERKTLVEAIVIYQKNVKKQTYALFGISAERTTFHLFCFYFIWL*

>peptide 3 (48 aa)
MYSLDQQDVCLRIYHGRRVSHERRLNQHTNVFSTYMSSWFMILTQESE*

>peptide 4 (49 aa)
MMRTYSCVRVHYRLMLIKKKNWSYESTTECGYVYREQLLKIILKKSDHL*

>peptide 5 (59 aa)
MDRYQRVEKPKAETQIHGGSRSQKQRQIDENEIRITSQGRMCNYITYSMTLLQIQERSV*

>peptide 6 (81 aa)
MQSWPNVLRAITRNTSTGVGGHWRIFYISFYWENAASSLVMTTDATTDTNATIGKGCLSVSGIQYGNKSTHWSQQLNQTPC*

>peptide 7 (30 aa)
MLCLELVLREQLFTYFVFILFGCSFGRKNK*

>peptide 8 (43 aa)
MNLSNLEGKNLNQYLYLNFNSNMDLIHTPYYEKYLLSENEKKN*

>peptide 9 (34 aa)
MSYGQLPGTRPQELEAIGESSIYLFIGKMQPHHW*

>peptide 10 (33 aa)
MEWKMHFKKISKNCAKSCLTTIVRNGLRGLQNRV

Sequence

>CNT30559395
ACACGCCATTCTCCTCTCACACGCCAACTCTCTCTCTCTCTTAAAACTCCTCTCCCCTAACCCACCAAAATCTCTCTCTCTCTCTAGAACCAATCCATCT
TCTTCATTCTTCTATTTTTTGTTGGCTGGTGCTAATTGATTTTTTTGTGTTCTTTGAAGAAGATGGATCGGTACCAAAGGGTCGAGAAGCCAAAAGCAGA
GACACAGATTCATGGAGGGTCGAGAAGCCAAAAGCAGAGACAGATTGACGAGAACGAGATAAGGATTACGAGTCAGGGGAGAATGTGTAACTATATCACT
TATTCCATGACTCTGCTTCAGATACAGGAAAGAAGTGTGTGATGCAATCGTGGCCAAATGTCTTACGGGCAATTACCAGGAACACGTCCACAGGAGTTGG
AGGCCATTGGAGAATCTTCTATATATCTTTTTATTGGGAAAATGCAGCCTCATCACTGGTGATGACTACAGACGCCACCACAGACACCAACGCCACCATA
GGTAAAGGATGTTTGTCGGTCAGTGGCATACAATATGGCAATAAAAGCACGCACTGGTCACAACAGCTCAACCAAACCCCTTGTTAAATAACAAACATTG
TAAAAGAGGTCATTGTAATTTTAAGAATGTGAGGGGGGATGTTGTATGAAAGAAAAACCTTGGTAGAGGCCATTGTAATTTACCAAAAAAATGTAAAGAA
GCAGACATATGCTCTGTTTGGAATTAGTGCTGAGAGAACAACTTTTCACTTATTTTGTTTTTATTTTATTTGGTTGTAGTTTTGGGAGAAAAAATAAGTA
ATAATTATTTTTTTTTCTTATTTTAAAACATTCTTTTCTCTTTGTTTGAGTTAGTTGTATTAACACAAGTTTTATATTAAAAAAATTGATTTTTGATAGT
AGTTAATTTTTTGCGTAGTGCCCGTGCGCACGGGCAATTACTAGTGATATAATAAAATAATATCCAATTGTATGATAAAATAAATTTTTATTTCAAATTA
TAATTAAATATTTAGACATCTGGGCATACAATTCCCAACATCTGGAATAGAAGGACAAATAGTCAATTTTGAAAGAACTTATTGTCAATCTCTTTCATAT
ATGAATCTATCTAATTTAGAAGGGAAGAACTTGAATCAGTATCTCTATCTCAATTTCAATTCGAACATGGATTTGATTCACACTCCATATTATGAGAAAT
ATTTACTATCCGAAAACGAAAAGAAAAATTGAAGTCTTTGTCTAAAGAATGCCTTGAGATGTATAGTCTCGATCAACAAGATGTATGCCTTAGGATTTAT
CATGGTCGACGTGTTTCACATGAAAGAAGGTTGAACCAACACACAAATGTGTTCTCAACATACATGAGTTCTTGGTTTATGATACTCACACAAGAGAGTG
AATGAATGGGAAGCATACAGTTATAGCATAGAACTACTGAGTGATTGGACTGCATAATTGTAGTTCAAGTGCCGTTAAATTATCCTAAGTTAGTCCTATT
TTAGTTTAATTATGTATTTTAATTATGATGCGTACTTATAGTTGTGTTCGAGTTCATTATAGGTTAATGTTGATAAAAAAGAAGAATTGGAGCTATGAAA
GTACAACAGAGTGCGGGTACGTATATCGAGAGCAATTGCTAAAAATTATCTTGAAGAAAAGTGATCATTTGTAGCTCGGAATGGAATGGAAGATGCACTT
TAAAAAGATCTCGAAAAATTGTGCAAAGTCATGTCTAACGACCATCGTGAGAAATGGACTACGAGGGCTCCAAAATAGAGTA