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Detailed information on CNT30559192


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30608460Actinidia chinensisGossypium raimondii10.1526.8194.5974reverse complement

Expression of CNT30559192

Peptides detected in this lncRNA

>peptide 1 (34 aa)
DLMIWSTTITRSKLLCLGSRTAYSMSTKCGSSMT*

>peptide 2 (61 aa)
SYDLEYYYYKIEVVMSWESYGIFHEYQVRVVNDLKTLNLIQASAYSIMISTLQSCKFYFVI*

Sequence

>CNT30559192
GATCTTATGATTTGGAGTACTACTATTACAAGATCGAAGTTGTTATGTCTTGGGAGTCGTACGGCATATTCCATGAGTACCAAGTGCGGGTCGTCAATGA
CTTAAAGACACTGAATCTAATTCAGGCCTCAGCCTATTCAATTATGATTTCTACATTACAATCTTGTAAGTTTTATTTTGTTATTTAAATTAAACATTCT
TCTTCTTTTTCTATGTTTAAAGAATTCTACAATTCTTTTTGAAACTTTCGGGTTGTTTTAAAGAAAATCAACACATTTTTTCTAACACAGAATACCACAT
AAAGATTTCTTTTAATGAATTGTTCAATTCATTTCTTTCAAATAAGCCATATCTTAGGTTATAGTTAAAGCTGCTAGTAAAAAAACGAAATAACTAGTTA
TGGTAGGCATGAAGAAGCTAAATGAAATATATTCGCTTTGTACATGAAGAGTTCGAATACAACAATCAACAATAATTTTATTGATTACAATCACTTGTAC
ACTTAACTTATGTACAACGACACACACTATTACTCACAAGAGATGACTCTCACACAAGAGGTAATACACTTACAATTTAGGAAGACACTTTAACTTTAGA
CACACACTCTTTAGTACTTGGACACTCTTCCTTTCTTTTCTCTTGCATGCATCTATGTCTCACAAATGAAGCTCCATCCCTATTTATAGGGACTAAAGGA
TAATTTTAGAAACACACACCATTCCATGC