Detailed information on CNT30557558


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30678825Panicum halliiSetaria viridis58.07100.0598.31824reverse complement
CNT30309180Panicum halliiTriticum aestivum59.3176.5197.961863forward
CNT30400777Panicum halliiTriticum turgidum59.3157.597.691863reverse complement
CNT30139291Panicum halliiLolium perenne58.3958.4898.151834reverse complement
CNT3018182Panicum halliiZea mays58.8793.2498.381849reverse complement
CNT30326143Panicum halliiAsparagus officinalis58.1359.2996.171826forward
CNT30595147Panicum halliiEragrostis curvula55.6553.3198.911748reverse complement

Expression of CNT30557558

Peptides detected in this lncRNA

>peptide 1 (51 aa)
MRKATDGPLSAITNNIGPIISTVRFNPNRTSQPKPAYNHLPNQTRSYSDQH*

>peptide 2 (66 aa)
MMLSHANVSRAMACFEHSNFFKVTAPEARPGQLRPGAHRRQKGSSRSVLASQADRPTRPKVQLRAF*

>peptide 3 (57 aa)
MQLPKERVAAHKHSLRFRHCAHGTERTQAPRVSRTMAGGLPAVTGPTHLMRQLLHEG*

>peptide 4 (99 aa)
AISVFLDAFGAVGSLAAPVQQNEGKGPWSDSSPTTWMTRSRSVLFKGHDNDPSAGSPTETLLRLLLPLNDKVQWTSRDVGGEEPPSSPRSEHFTGPFNR*

>peptide 5 (43 aa)
MIRFNGLLATSGAKNRLRRRDPNTSPDHSIGRSDGRCVQRAGT*

>peptide 6 (43 aa)
MHVESTYEEGNRRTTERDNKQYRANHKHSPFQSEPHKPTEASI*

>peptide 7 (44 aa)
MLSQLFVFHKSKNFTSDYEIRMPPTVPINHYSDPEGQHNRTGIL*

>peptide 8 (44 aa)
MRPSRKSGFVARISSRITTVIRVAHTIKQTITDLMSHSQFHSSN*

>peptide 9 (36 aa)
QYQCSLTPSAPWVLWRPPSNKMKARGLGRTVARRHG*

>peptide 10 (32 aa)
MKYECPRLSLLIITPIPKANTIGPESYDVIPC*

>peptide 11 (41 aa)
MQIFRSSRTGFKHMSHSINSPGTYFGNENKILKNPLCDFGK*

>peptide 12 (37 aa)
MTTGRINQVARPPRQADNGFYTGHQPGRLSFIQRFRL*

>peptide 13 (30 aa)
MMRRRHEGRAIRRVIMNHRISEQSPRQPFI*

>peptide 14 (49 aa)
MDFSRRRGRRTAFVAAIRTLHRTIQSVGATGGVYKGQGRSQRELMTRAY*

Sequence

>CNT30557558
GGCAATATCAGTGTTCCTTGACGCCTTCGGCGCCGTGGGTTCTTTGGCGGCCCCCGTCCAACAAAATGAAGGCAAGGGGCCTTGGTCGGACAGTAGCCCG
ACGACATGGATGACACGTTCACGGTCTGTTTTGTTTAAGGGTCACGACAATGATCCTTCCGCAGGTTCACCTACGGAAACCTTGTTACGACTTCTCCTTC
CTCTAAATGATAAGGTTCAATGGACTTCTCGCGACGTCGGGGGCGAAGAACCGCCTTCGTCGCCGCGATCCGAACACTTCACCGGACCATTCAATCGGTA
GGAGCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGTCAACGCGAGCTGATGACTCGCGCTTACTAGGCATTCCTCGTTGAAGACCAACAATTGCAAT
GATCTATCCCCATCACGATGAAATTTCCCAAGATTACCCGGGCCTGTCGGCCAAGGCTATATACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCA
GAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAACGGCCATAGTCCCTCTAAGAAGCTAGCTGCGGAGGGATGGCTCCGC
ATAGCTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCA
AGAAAGAGCTCTCAGTCTGTCAATCCTTGCTATGTCTGGACCTGGTAAGTTTCCCCGTGTTGAGTCAAATTAAGCCGCAGGCTCCACGCCTGGTGGTGCC
CTTCCGTCAATTCCTTTAAGTTTCAGCCTTGCGACCATACTCCCCCCGGAACCCAAAGACTTTGATTTCTCATAAGGTGCCGGCGGAGTCCTATAAGCAA
CATCCGCCGATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGAGCCCCCAACTTTCGTTCTTGATTAATGAAAACATC
CTTGGCAAATGCTTTCGCAGTTGTTCGTCTTTCATAAATCCAAGAATTTCACCTCTGACTATGAAATACGAATGCCCCCGACTGTCCCTATTAATCATTA
CTCCGATCCCGAAGGCCAACACAATAGGACCGGAATCCTATGATGTTATCCCATGCTAATGTATCCAGAGCGATGGCTTGCTTTGAGCACTCTAATTTCT
TCAAAGTAACGGCGCCGGAGGCACGACCCGGCCAATTAAGGCCAGGAGCGCATCGCCGGCAGAAGGGGTCGAGTAGGTCGGTGCTCGCCAGTCAGGCGGA
CCGGCCGACCCGGCCCAAAGTCCAACTACGAGCTTTTTAACTGCAACAACTTAAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGAC
TTGCCCTCCAATGGATCCTCGTTAAGGGATTTAGATTGTACTCATTCCAATTACCAGACACTAACGCGCCCGGTATTGTTATTTATTGTCACTACCTCCC
CGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGAAATCGAACCCCAATTCTCCGTCAC
CCGTCACCACCATGGTAGGCCCCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGCGTCGCCGGCACGAGGGCCGTGCGATCCGTCGAG
TTATCATGAATCATCGGATCAGCGAGCAGAGCCCGCGTCAGCCTTTTATCTAATAAATGCGCCCCTCCCGGAAGTCGGGGTTTGTTGCACGTATTAGCTC
TAGAATTACTACGGTTATCCGAGTAGCACATACCATCAAACAAACTATAACTGATTTAATGAGCCATTCGCAGTTTCACAGTTCGAATTAGTTCATACTT
GCACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAGGATCAACCAGGTAGCACGTCCTCCTCGACAAGCCGACAACGGCTTCTACACTG
GGCATCAACCGGGTCGACTGTCGTTTATTCAGAGGTTCCGACTTTGAGAGGAAAGAGGAGCCGAAGCAGCCTCATCCTATATCGTTAGCGTCATCCAGGA
CCAATAGCACAAGTGAGGTAGCCTTGGTGGGCTTGGCCAATGAGATCATTACCACGAGGCAACGTCAATTGGCTATAAAGCCGACGCATCACACCCGAAG
GGTGGACGCGACGAAGGCAACATGTAGCGAATGCAACTTCCCAAGGAACGGGTAGCAGCACACAAGCACTCGTTAAGATTCAGGCATTGTGCCCACGGCA
CTGAAAGGACACAGGCACCGAGAGTCAGCCGCACAATGGCGGGGGGCCTCCCAGCAGTCACAGGTCCAACACATCTCATGCGCCAGCTGCTACACGAAGG
TTAGGCCATCCAAAGCATCACTCCGTGCAATGCACGTCGAGTCTACTTATGAGGAAGGCAACCGACGGACCACTGAGCGCGATAACAAACAATATCGGGC
CAATCATAAGCACAGTCCGTTTCAATCCGAACCGCACAAGCCAACCGAAGCCAGCATATAACCATCTCCCTAACCAGACTCGATCATATAGTGACCAGCA
CTAGCCAACCGGATCTGTTTCAATCCAAGCCGCACAAGCCAGCATATAACCATCTCCCTCACCAAACTCAGTCGTATAGTGACCGGCCTTAGCCTACCGA
TGCAAATATTCAGAAGCTCGAGGACTGGGTTCAAGCACATGTCACATTCCATCAACTCCCCAGGCACGTACTTTGGAAACGAGAATAAAATCCTCAAGAA
TCCTTTGTGCGATTTTGGGAAATGAGGTCAACGACACACGAGTGACCATCCAAATCGTCGAACAACAGAAACCCACACCGGCTAGCCTTAGCAAGCCCCT
ATACCACCTTGCTTGTTGGTGCAGTGCTGCGAGGCATAGGGACTGATTCGAGCACATGACGCATTCCGTCAACTCCCCAAGCACGTACGCTGGAAACGAG
GATAAAATCCTCAAGGAACCATTGTGCGATTTTGGGAAATGAGGTCAACAACACATGACCGTCTCAATCTCTAAGCACACGAAACCTAGGGACTGATTCA
AGCACATGTCACATTCCGTCAACTCCCCAAGCACGTACGCT