Detailed information on CNT30557146


BLAST search results

BLAST vs Swiss-Prot:
sp|Q01516|ALFC1_PEA, E-value = 9e-13

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30578122Panicum halliiOryza barthii22.226.8590.7454forward
CNT30604735Panicum halliiOryza punctata27.167.8393.9466forward

Expression of CNT30557146

Peptides detected in this lncRNA

>peptide 1 (75 aa)
DGENTCLSCLISSVVYISRRRRSIADDRLFKYLVAVVLDEHPLLGLGAAPGSWPWRAAAARPAPPSRSPARRPTS*

Sequence

>CNT30557146
TGATGGCGAGAATACGTGCTTATCTTGCTTAATCAGTAGTGTTGTATATATATCTCGTCGTCGTCGGAGTATAGCCGACGATCGCTTATTTAAATATTTA
GTAGCTGTAGTTCTTGACGAACATCCCCTCCTTGGCCTCGGCGCTGCGCCAGGGAGTTGGCCTTGGCGCGCAGCAGCAGCGCGTCCTGCGCCGCCTTCAC
GTTCTCCGGCGCGCCGCCCCACGTCTTGAGGCAGGTGTTCTGC