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Detailed information on CNT30556841


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30468477Panicum halliiSaccharum spontaneum14.1130.2289.7168forward

Expression of CNT30556841

Peptides detected in this lncRNA

>peptide 1 (41 aa)
VPCPQLESLMKLSLLCSHSDVSSSSARYITVRPIVCCTETL*

Sequence

>CNT30556841
GTACCTTGCCCGCAACTTGAATCTCTGATGAAGCTGTCACTCCTGTGTAGCCATTCTGACGTCTCATCATCGTCAGCACGGTACATAACAGTAAGACCAA
TAGTCTGCTGCACCGAGACATTGTAGCTGTACTGCAGGAATACGAAAACTCGCTATTCACTCAGTTTATTTTCCATAATAAGATTATCGAGGTCTCTCTC
GCCTGTCCAGTGATTTTCTTCGATTTCCTTGTTCTTCTTTCCCAGGATTTCCACATCGCACTCATGGAACTCTGAACCATGCTTTCAAGTACAGAGGACT
CCTGAATAAGCTGACTTCGTTTTATTGACGCTTAGTTTCAGCACGAATAGATTCATTCTCTCCGGTAATCCCCTTTTTCCTCGTGTAAGCTTCACGATGC
CTCTTGTTACATTCATTTTTCTGCTCTTCCGTTAACAAAGCAGACAATGCTCGGTCCCTCTGCCGCTTAAGCTCTTTTGAGT