« Back to Oryza glaberrima search


Detailed information on CNT30556131


BLAST search results

BLAST vs Swiss-Prot:
sp|Q6ENB2|RR15_ORYNI, E-value = 2e-30

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30221457Oryza glaberrimaHordeum vulgare40.3664.6294.25400reverse complement
CNT30371210Oryza glaberrimaOryza glumipatula20.1899.594.5200reverse complement
CNT3051979Oryza glaberrimaAmborella trichopoda14.7324.9686.99146forward
CNT30320136Oryza glaberrimaAsparagus officinalis19.0738.4187.3189forward
CNT30575902Oryza glaberrimaOryza barthii18.6761.4696.22185forward

Expression of CNT30556131

Sequence

>CNT30556131
TTTTTTCCATTCCTCTGTGTAAATAGCCTAATATGGGTTCACAATCAATAACATCTTCACCATCGAGAGTAACGATCAGTCGAAGAACACCATGCATTGA
TGGGTGCTGAGGGCCCATATTGACTATCATGAGATCTTTTCTTGTAAGCGGTAGACTCATATCCTTTCTTCCTTAATTCATTATTCCATGAAAATGGATT
ATTCCATGAATTCCTCAAAACGAGGCTCATCAAAATGCAAAATCTAAGACTACTATAAGACTACTAATAAAATAGAAAAAAAATTCGAACGATGAAATTA
CCGCTCCCTAATATCCAACTGACTGATTAATTTCTTATAACGTACTCTATTTTTCTTTGCCAAATAAGCCAGCAAACGTTGACGTTTTCCCAAAAGTCTT
CGGAGACCTCTTTCCGATGAAAAATCTTTTTTGTGTAATTCCAAATGTGAAGCAAGTCTCCGTATCTTATTGGTGAAACTGAATACTTGAAATTCAACAG
AACCCCAGTTTTTCTTCTTTTTCTTCTTTAACCATAAATCCAAAAATTTTTCTACCTCCTTTCTTTTTCATGTATTTTTCTGATCAGGAAAAATAAAAAA
TTATGTCAGTTATTTTGAAGTTATTCTAATCTCGTACACACAAAAATTTGCAATTATTCATCTACTACTGGAATTTGGATTTATTTTATCGATGCAAATT
GGATTTGGATAGAAGGGTACATTCTTTTATTTTAGATAGAAGAAAAGTTTCTTCTATCTAAAATAAAAGAATTTTGCTGATTTATTTATTGCTATATCCA
ATTTATGGAATTGATACACCGTTTAATTGATATCATTTAGCAAAATGAAACATAGCATATGCATCCATCTTTCGGCTCGAGAATTTCACGGGATAGAGAT
ATGGTATAAGAAATAGGCTATTAAGTAACTCTAAATGAATTGTGGATACATCTGTATCCTTAACATACTGAAACAACTGCCATTATTCGTA