Detailed information on CNT30555766


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT002495, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30597185Oryza glaberrimaOryza meridionalis9.6233.8299.08326reverse complement
CNT30101131Oryza glaberrimaOryza rufipogon13.7521.1993.35466forward
CNT30576723Oryza glaberrimaOryza barthii31.8626.0491.391080forward

Expression of CNT30555766

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MAFIQFGSSFSLIESILFWMATCGISSIG*

>peptide 2 (35 aa)
MNLDWDSTVETVDFWVASTVPTDIRLPSTCEEVWA*

>peptide 3 (78 aa)
MSVSESLVLGSDNTLLRTRSTSYDLTSFGTPRILRLGRSREIELLMTMVPISSGDILRSGWISPQRSRRVACCQRIHS*

>peptide 4 (65 aa)
MSSSTKLKPKVEVLLLTPYASMRITSRASLFPRPQLYTAQLAFKLCVILAAPSPPTVVGVTLPPR*

>peptide 5 (64 aa)
MVVFLLESVPGEIRDRAFVSPDSIRRHRRGLAVLIPEVDIWRLVLAYVGLYVVASVVPSRLWWV*

>peptide 6 (64 aa)
MRFIGVNLFVNPDCDDMVSYNQFSLKTPGTPELLSLLITLRSEHMGIIVHGTGTTDVSNQKALP*

>peptide 7 (34 aa)
LSLSRCLLSTMTGHHHCHRPISSSTALHPKTLRH*

>peptide 8 (49 aa)
MSKRMQRRSRLLKLYQLTDPGLDTVKHVGFRIISFGIRQYLTAYSFDII*

>peptide 9 (39 aa)
SLSLSLSSLYHDRPPPLPPADLLFHSPTSQNLAPLARPR*

>peptide 10 (44 aa)
MSAGGKHLPPPFQPLPSLPLPDDCLLGCASLGHVSPSTSPFPAN*

>peptide 11 (55 aa)
MFPRQRRRSPPTRAPAPLLSLFSVFGWKKKQKERGYGRKRKRKEKNLPDRWAHQQ*

>peptide 12 (62 aa)
MEQVPLMLVTKKLCHDKANVFGTSWIAGKAYIYCSMNILKTIRIAVLAVIGHWDSQWHLESI*

>peptide 13 (51 aa)
MASCLGVCWLVCCGFCCSLPSMVGVDCVDCPCMLIVWIFHILVLLKNLFRK*

>peptide 14 (47 aa)
MLACMLWLLLFPPVYGGCRLCRLSVYVDCLDFSHFGPFEKLISQIDP*

>peptide 15 (52 aa)
MWYFEHRIIRLPISDLFALEQGKLLFLPLSIITLYSISLFYALVIHDFECIT*

Sequence

>CNT30555766
TCTCTCTCTCTCTCGCTGTCTTCTCTCTACCATGACCGGCCACCACCATTGCCACCGGCCGATCTCCTCTTCCACAGCCCTACATCCCAAAACCTTGCGC
CATTAGCTCGGCCTCGATGAGGTGAATCCATTTTGCCCCTTTCCACCTTCTCTCCCCCTTTGAATCAAGCCATCACCACCACCATCCATGTCGGCCGGAG
GTAAGCACTTGCCGCCGCCGTTCCAGCCTCTTCCCTCACTCCCTTTGCCAGACGACTGCCTCCTTGGGTGCGCGTCGCTCGGACATGTTTCCCCGTCAAC
GTCGCCGTTCCCCGCCAACTAGAGCACCGGCGCCCCTCCTCTCCCTGTTCTCTGTGTTCGGCTGGAAGAAGAAGCAGAAGGAGAGAGGATACGGGAGGAA
GAGAAAAAGAAAAGAAAAGAATCTCCCTGACAGGTGGGCCCATCAACAGTAGCCTTTCATACTTTTCTAGATTTAATTCAAATCCCAATCTTTAGAAGCC
CATATCTCCTAAACCGTAGATCCGATTCCGATGAAACTTGGACCTAAATTCATCTAAATTCAAAAGCTACATTTTGATATCAAATTTGCTATTTTACTAT
TTGAAATTCCTTAATGCCATTTGAATTTATGTTTGACTTTCAAATATTTCCTTTTTACCCAAAATTACTCTTTAGCCACTAAACAACCACCGTTTGGAAC
TTTACGCCTTCCATGAGGACGTTCGCATGGTCTACTGACCTCAACGTCGAACCGTTGGATGTCAAGTTCGACAAAACTCAAACCTAAGGTCGAAGTGTTG
CTTCTGACACCTTACGCCTCAATGCGTATAACGAGCAGAGCTTCACTATTCCCTCGACCTCAGCTGTACACCGCACAGTTAGCTTTTAAGCTCTGTGTAA
TCCTAGCCGCTCCGTCGCCACCCACGGTTGTCGGAGTAACACTTCCACCCCGCTAAACCTACACAAACTTCCTATCCCTCTAGCCGTTATATTGTCTGTT
GACATCGGCTAGACATCAAACCTAGTCATCATACTACCCAATTCTAATGACGACTAGCAAACACCCAAATCCCAGCCGATATTCATCCTACCTCGATATT
GGCTTAATCAAATGAAACTCTAGCCAGCCAGCCTGCTATCCAAACTCCATACCAGCCATTTACCCTCCAACTACCCATAGCTTAAACATGAAATACGAGC
CGATATGCTATCCTATTTTAGCATCGACTCGAGAACAACTAAACCCTAGCCACTATTCCACCAAAGCCTAATCTTGATCCCCTCTCCAACCTAGCCTCCA
ACCCCTTAGAGCCTACACATAAAATACTAGCTCAATAACCCATCAAGGAGATAGTTATACCCCAAACCTAGCCTTTCTCGCGCTTCATCGTTTTCTTGCT
ATTTTATGGCTTTTATTCAATTTGGTTCTTCCTTTTCTTTAATAGAGTCTATTTTATTCTGGATGGCAACATGTGGTATTTCGAGCATCGGATAATCAGG
TTGCCTATCTCGGATTTATTTGCGTTGGAGCAAGGCAAGTTATTATTCCTCCCCTTGAGCATAATTACCCTATATTCTATATCTCTTTTCTATGCATTAG
TCATTCATGATTTTGAATGCATAACTTGAACATATAGCAAACCAGATATGCTAGCTTTTGCTTAGCCCTGCCTAGTTAGATTATGCATAAAATTTAATGA
ACTTAGATTGGGACAGTACGGTAGAAACGGTTGATTTCTGGGTGGCTAGTACTGTTCCAACCGACATAAGACTGCCAAGTACATGTGAAGAAGTATGGGC
ATAGACCTAGCTGATTAAGTTATCTAGCAAATATGGTACCTCTGTATAGTGGTTCTTCTTAAGTCCTCGCGCAGGAGGCAAATTTATGCCGCGAAGGGCA
ATTGTGATATTTACCGAGGCGCAGGTAAATATATGAGATTTATTGGCGTCAACTTGTTTGTGAACCCTGATTGCGATGACATGGTGTCATACAATCAGTT
CTCTCTAAAGACCCCGGGAACGCCAGAACTCCTCTCGCTGCTGATAACGTTACGTTCAGAGCACATGGGGATTATAGTTCATGGAACAGGTACCACTGAT
GTTAGTAACCAAAAAGCTTTGCCATGACAAGGCTAATGTGTTTGGCACGTCATGGATTGCGGGTAAAGCGTACATCTACTGCAGTATGAATATTCTCAAA
ACTATTCGAATAGCCGTGCTCGCGGTTATCGGGCATTGGGACTCACAATGGCATCTTGAGTCCATTTGATGTTCTTGCCGAAGTCAGGAGTTCAATCACA
TAAGTTAATTCCCTTTTAACTTAATCTTCAAGTTTAGGTTATTTAGATGGTTTAAGTCTATAGTAAAACAGCAGAGTTAGGTCATTCTAAAGCTTCTGTT
GTAATAGTTAGCCACAATCTCGTAAACACCCTATTACTTTATGTAATAATATCTCCTTCAAAGCTATGTCTAAACGTATGCAAAGACGATCTAGATTGTT
GAAGCTGTATCAACTTACTGATCCAGGGCTTGATACAGTTAAACATGTCGGTTTCCGAATCATTAGTTTTGGGATCCGACAATACCTTACTGCGTACTCG
TTCGACATCATATGATCTGACGTCTTTTGGTACGCCACGTATCTTGAGGCTTGGTCGATCTCGAGAGATCGAATTGTTGATGACGATGGTTCCAATCTCG
TCGGGAGACATACTCCGGTCAGGTTGGATCTCCCCACAGCGAAGTCGTCGAGTAGCTTGTTGTCAGAGAATCCATTCTTAAACCCATCTCGTCGAAAACC
TTTAAGCACCAAAAATCCCCCTACCTGGCGCACCACTGTCGACGTTTGATGTCGCGATTCCGGTATTTGCATAGTATGGGGATCGTTGGTACCAGGGTAT
ATGCGAGATTGAGGTAAAAGAGACGGAGACGAGGATTTTTATATAGGTTCGGGCCCCTGAATTGTCAGGTAATAACTCTACATCCTGTTGGCCGAAGCCG
GTCGTTGCTCTTATTCATCATAATCACACTAGTACAATATTTGGGGTAGCCTATCTAACTGTTGTCGACATGGCGGTCTGAAGGTCTGACTCGTAGTCGA
CAACATGGTAGTCTTCCTCCTCGAATCCGTGCCCGGCGAGATCAGAGATAGAGCTTTCGTCTCTCCTGACAGTATCCGGAGACACCGTAGGGGACTAGCC
GTGCTTATCCCTGAAGTCGATATATGGCGTCTTGTCTTGGCGTATGTTGGCTTGTATGTTGTGGCTTCTGTTGTTCCCTCCCGTCTATGGTGGGTGTAGA
TTGTGTAGATTGTCCGTGTATGTTGATTGTCTGGATTTTTCACATTTTGGTCCTTTTGAAAAACTTATTTCGCAAATAGACCCCTGAAAA