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Detailed information on CNT30555751


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696470Oryza glaberrimaOryza sativa36.8937.6397.72263forward
CNT30671914Oryza glaberrimaSetaria viridis61.0126.1697.01435reverse complement
CNT30524650Oryza glaberrimaSetaria italica61.0120.2197.24435reverse complement
CNT30730480Oryza glaberrimaCorchorus capsularis35.3420.1390.08252forward
CNT30156864Oryza glaberrimaPistacia vera20.7610.0697.97148forward
CNT30185187Oryza glaberrimaSecale cereale59.7512.0498.12426reverse complement
CNT30292784Oryza glaberrimaTriticum aestivum59.4714.1497.88424reverse complement
CNT30401406Oryza glaberrimaTriticum turgidum59.7514.5597.89426reverse complement
CNT30234026Oryza glaberrimaBrassica oleracea24.6844.3391.48176forward
CNT30441792Oryza glaberrimaAegilops tauschii57.0865.3396.07407reverse complement
CNT30670388Oryza glaberrimaTriticum dicoccoides59.7515.1997.65426reverse complement
CNT30140161Oryza glaberrimaLolium perenne59.7512.5197.65426reverse complement
CNT30207637Oryza glaberrimaHelianthus annuus34.0812.4293.83243reverse complement
CNT30688988Oryza glaberrimaTriticum urartu59.7521.9198.12426reverse complement
CNT30721631Oryza glaberrimaTriticum spelta59.7512.2797.42426reverse complement
CNT30346086Oryza glaberrimaEragrostis tef57.7854.3598.54412reverse complement
CNT30595568Oryza glaberrimaOryza meridionalis49.9391.7598.6356forward
CNT30103741Oryza glaberrimaOryza rufipogon59.8981.1897.42427forward
CNT30499372Oryza glaberrimaDigitaria exilis61.0112.897.24435reverse complement
CNT30603680Oryza glaberrimaOryza punctata60.871199.31434reverse complement

Expression of CNT30555751

Peptides detected in this lncRNA

>peptide 1 (82 aa)
TRPSILYLFTCVGLGYGQLTGRIALPIRSFFLEVSTVVDYDNSRDRLLRSSRLWQGGTLCSLATSSLIKRLKAPMEDEKGED*

>peptide 2 (39 aa)
MFARWAECSPTSESSPLERNPCPPQQENGCAATGPAEPL*

>peptide 3 (31 aa)
RALVYSTCSPVSVWGTVSSPGGSPSQFEVFS*

>peptide 4 (49 aa)
MKKARTEMRKEGVRQDDFGSHVKVLRKVSAGARSRSRHVRPLGRVFAHF*

Sequence

>CNT30555751
ACGCGCCCTAGTATACTCTACTTGTTCACCTGTGTCGGTTTGGGGTACGGTCAGCTCACCGGGAGGATCGCCCTCCCAATTCGAAGTTTTTTCCTAGAAG
TTTCAACCGTCGTTGACTATGACAACAGTCGCGACCGACTATTAAGATCCTCGCGACTATGGCAGGGCGGTACGCTCTGCTCTCTCGCGACCTCTTCTCT
AATCAAAAGACTAAAGGCCCCTATGGAAGATGAAAAAGGCGAGGACTGAAATGAGAAAGGAAGGAGTTCGGCAAGACGACTTCGGTTCACACGTGAAAGT
GCTTCGAAAGGTGTCAGCAGGTGCGCGGAGCCGGAGCCGGCATGTTCGCCCGCTGGGCCGAGTGTTCGCCCACTTCTGAGTCTTCGCCTTTAGAGAGAAA
TCCGTGTCCGCCCCAGCAAGAAAACGGCTGCGCGGCGACCGGGCCAGCTGAGCCCCTCTGAATTAGTTGACGGCTTTGATGACTCGACGGTGAATATTAA
GGAAAGGAGAGCGAGGGGAAGAGGGGGCAGCCCTCGGCCCGATCATCCAATTCGCTCCGACGATCCAGGCATGGTTCAGTAGTCAAAGCAACTTCGTCAC
TTTCGTGTACCCATCGGACGGCAGCCCTTTCGGGGGTTCCTTAGGGACCGATTCACTCTGCGTAGATTGACTGAACGCAGAAAGCCTTCCACTAGCAGGC
GATCGTGTTTTTC