Detailed information on CNT30555664


BLAST search results

BLAST vs Swiss-Prot:
sp|Q2QLY5|METE1_ORYSJ, E-value = 2e-38

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672513Oryza glaberrimaSetaria viridis25.7914.2592.9857forward
CNT30604899Oryza glaberrimaOryza punctata93.2188.4198.54206forward

Expression of CNT30555664

Peptides detected in this lncRNA

>peptide 1 (61 aa)
LNCLPFPTIASRDSRVVRDAARSSAQMLRPSTTPAKRYLPEGKPALLTRSRVLAPRIRSKP*

Sequence

>CNT30555664
TGCTTAATTGCTTACCCTTTCCAACAATAGCCTCAAGAGACTCGAGGGTGGTGAGAGATGCGGCGAGATCATCAGCCCAGATGTTGCGCCCATCCACAAC
ACCAGCAAAGAGGTACTTGCCAGAGGGGAAACCAGCACTCTTGACAAGGTCAAGAGTCTTGGCTCCACGGATAAGGTCAAAACCATAAGCAGTCACGCTG
TTCAGGGATGTGAGGGTCCTG