Detailed information on CNT30555582


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697615Oryza glaberrimaOryza sativa32.51101.0598.262017reverse complement
CNT30597168Oryza glaberrimaOryza meridionalis20.571.9595.051272reverse complement
CNT30110006Oryza glaberrimaOryza longistaminata20.9266.9896.151298reverse complement
CNT30578473Oryza glaberrimaOryza barthii79.8978.899.684957reverse complement

Expression of CNT30555582

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MLGLDFPKITVTRSCLQTDGAYIATLLTQ*

>peptide 2 (30 aa)
MLAHVNKLTEGICQSIHTQKGRYYKNKLSF*

>peptide 3 (35 aa)
MEWRKHLIHQRLFLTMTNPIQQASISLVYKCSYYK*

>peptide 4 (62 aa)
MQFQSHKKNDATKQVLRTKLKLRKNASHLARTCKGHRRMKWKFHTCRYIKKMKWKFHTCRYI*

>peptide 5 (31 aa)
MYFLHFQYVVRHCTLIGSKSKNNQKALAHAI*

>peptide 6 (65 aa)
MDKITMLQLRIIKTNYHVTTIIQTKSVYGRLYHLIITISNIRGKLNEHTNYKMTPNQHTRGPIIC*

>peptide 7 (37 aa)
MLRSINVLEINLQINFTQSSQKISESPSQPCNIVRKK*

>peptide 8 (60 aa)
MGPSSTKKKQRGSGCIYRGAERRTTEEETESVGWSRVASGIGGRRLFLSRSESETRLGDVI

>peptide 9 (58 aa)
MKCYNATFNTHKMKARENNATRAIEFHSIQTKSVYGQNYHVTTQDYQNKLPCYNYYTD*

>peptide 10 (45 aa)
MAATSLVMPRKNTHKQYLFELVSHALLDIDTSNGTVIALTSNKQP*

>peptide 11 (43 aa)
MQTGPSRNQILLLRTPPWFIKQLFLLRRNFNQWLYNVEVHKCS*

>peptide 12 (36 aa)
MLYISCSVSMALPHKAKNSHWQATMCSCLRSFLGKS*

>peptide 13 (39 aa)
MEVPHMQVYKKNEMEVPHVQVYIKKKEEGILHKTRSQLS*

Sequence

>CNT30555582
CCCCAAACATAACACCCCAACACGTCAAGTGAAAAAAAAATTGGAGCACCTCTGACAGTTAAACAGTATGAAGTTAGTGAGTATAAAGAGTAGATCGAGT
TAGCTACCCATAGCCCATCATAGCATCTACCAACATCAAGGAGAGCAAAAACGTCGAATAAAGCAACTATCGTCATAATCAAATACTAGTAATTCACCAC
AAGCAACCTAGGCAGAAGGAGCTATATATAACCATACCGACGAAAATAAACAAATGCAAATGCAGTTTGCATTAGACTAACAATGCAAATGCGCATAGAA
AAACAGACTAACTACCACCACTAGGTTCCGGTAATTATACTAGTATATGCTAGTTTGCCAAACAGGTAGATAACATGAACTAAGTTCAACATCTAAGGAT
AACTGGAACGCTACGCTAATAAATTTAGCTAAAACCAAATTTTTCGAATGAAATCGTCTTATCATTGATTAACCGATTTTCTGTGCTAAATTTTTAGCAT
CCGACAAGTGGAAGTCCATACTCAATATTGCCTTCAAAGGATATACATGAAATACAAAGTCAGCACAAGTGCATTTTCAGAACTTAGGACATTCAACATG
GTTAATACTCCCGACACATAATTTAGGATATTCAACATGGTTAAATACCACAACACATATCTCAATTATTAGTGTACTATGCAAAGAAAAAAATTAGATT
AAGCATGGCGACGTTACGGAGTAAAAATTATGTTCGGATTATATATTCCCTAAATAAATGTTAGCTCATGTAAACAAACTGACAGAAGGTATATGCCAAT
CAATACACACACAAAAGGGAAGATATTATAAGAACAAGTTATCATTTTAATAATATTTAATTTAATTACATATTCATCATCCTGTTAAAGATCATATCAA
ACCACGTTTGAATGGATAAGTCGAAAATATTTTAAATAATATAGATTCAAAACTATGTGCACTATATTAAATTTAATTCCATATCCATCACCCTATTAAG
TAACTTACTAAATCAGAACTGTAGTGCATCAAAGGAAATAGCTGAAGAAAACACGACATAAATCAGAAGAAACTTGGCAAATGATCAAGTCATAATAAAA
TTACATTAATGTAAGCATTTTAAGTGTATCACATTGCAAAAAACATTTTGAAGACATCTTCTGATATGTACTTTATGCACAGTAATAGGAGGTAAATCAA
CGCATAACCACACAGAATGGGCAATGACACACGAAATATGATTAAACAAACATGAGCTGGTAAAAGAAAACTAAATACATAGTTACTAGCTCAGCAATTT
CCATAAAAAAAACATACAAACACTATATCTATTTGACCTCAATCTCATGAATTACTAGATCTTCACAAGTATTCGCATAGTAACACAACATATATTGACA
TCAAATAAATAAACATCAGAAAGAAACCATAGAACATAGATATGATACTTTCTAGCCTTTGGAACAGAATGCAGATGGAAAACTAATCAGCAAGAATGAA
ATGTTAATCACGCGAACAAAATTTAGTAAAAAAACAATTTTTGGGAATGAAATCATCTTATCGTCATGCAAATGATCATTTTTACTAAATTCCAAACATC
TGACAACTAGAAGTCCATACTGTAACATGAAAAAGACAATATTTGGCAGAAAGCTCATGTAAAATATATTCTCACACAACTGAAATCATCTGGTGCCAGT
GGATTTAGAATTTAGGACATTTAACATGATTAATACTTGTACATTCCAACACATACAACTCTAAATTAGCACCTTATTATGCAAAGCAACTAAATTTGGA
TTGAGCGTGTATAGCAATCACTATTAACAACATTAAAAATGTTAGGATTAGATTTTCCTAAAATAACTGTTACTAGGTCATGTTTACAAACTGACGGAGC
ATATATAGCAACATTATTAACACAGTAAAGAAAATGTTAGGATTAGATTTTCCCTAAATAAATCTTACTAGGTCATGCACACAAACTGATAGAACGTACT
TACGTACATGCCGACACACACATAAGGGTAAGGCATTAAGAGAACAAGTTATCAATTTTTAATAATATTCAATTTAATTGCATGTTCTAAATCCTGTTAA
AGATCATATCAATTCAGGAGTCAGGTGGTGGAAAGGATAGGTTTAATAAGTAGCTATATAGATTCAGGAGTCAGGACTATGTGCATTATATTTAATTAAA
TCCATCATCTTGTTAAAGTAACTACGAAGACTATCAGAACAGTACTGCATCAAAGCTTGGTTAGGGATCAAGTCATTATCAAAATGATATTAATGTAAGC
ATTTTAGGTGTATATCACACTTAAAACCATTTTAAAGTCATTTTCTGATATGTACTTTTTGCACTTTCAATATGTCGTACGTCACTGCACTCTAATAGGA
AGTAAATCAAAGAATAACCAAAAAGCATTGGCACATGCAATATAATTAAACAAAATTCTTGCAGGAGCTAAAGTAAAAGAAAACTCTAATTAAACCAAAT
TAGCCGCCTTATTTATAAAAACGCGAAAGGTGTGAAGGCATCAAAGCTTTTAATAGCAATACAAATGGCAGCTACTAGCTTAGTAATGCCTAGAAAGAAC
ACACACAAACAGTATTTATTTGAACTTGTATCTCATGCATTACTAGACATAGACACAAGTAATGGCACAGTAATTGCATTGACGTCAAACAAGCAACCAT
AGAACATTGATACGATATTTCTAATATTTGGTTATGCAGATGGAAAACAAACAATCTGGGAATTAATAATTAGCAAGAAAAAAAAATGAAATGTTAAGGC
GCTAGCTGGATATAGGATATATTTAGCACAAAGAAAGCATCAAGTTTTAGACCATAAAATAAAACTATTTGCCTAGAATAAATTAATGCTACAAAAACTA
AAGCACCTATACATTTAGCCAAAAAGAGATTACTAAAACCACCAGATAATGTATGAAGAGATTTAAGGTTGGTTCAAATTAAAAAGACAAACTGAAACCA
TGCACACAGAGTTGATGCACAAATAAAACAACTGGTGGACAATCAAGGTTCTCAAAACCACTATACTAGTCTAATTAGACAAATAAAATGGAGAACTTGT
ATGCAGTTTCAATCACAGATTTATTGACAAGAGAAATAACCAGTTAGTGAATTCTCTAGCTTGTATGCAATTTCAATCACACAAGAAAAATGATGCAACA
AAACAAGTCTTAAGGACAAAATTGAAACTAAGGAAGAATGCTAGCCATCTAGCAAGAACATGCAAGGGCCACCGTAGAATGAAATGGAAGTTCCACACAT
GCAGGTATATAAAAAAAATGAAATGGAAGTTCCACACGTGCAGGTATATATAAAAAAAAAGGAAGAAGGGATTCTACACAAAACAAGGTCCCAGTTGAGC
TAAGTTTATCTTCACAACGTATAATAAAATTGATAACTATATAAAGCATTACACTGGACAAAAATACTAATAAGCATGCACATTTAAGTGAATTAATACA
TGCAAAAGGATGCTATATATTAGTTGTTCTGTTAGTATGGCACTACCTCACAAGGCAAAAAATTCTCATTGGCAAGCAACAATGTGCTCTTGTTTAAGGT
CCTTTCTTGGCAAATCTTAATTGGGGATACTATGTTGAATGAGATATAATAATTATAAAGAAAGAAATATACCAGACAAACTGTAAGAAGAAACAAGTTA
GTGATAATGTGTTGTTGTGATTAGCAACTAAGTTCAAGGGATTCACCTCAATTCAAAAGCCCTGGACATAAGATATATAATTTAGGACAATTCCTATCAA
GCATAATATTTAAAAAACATCCACATTTCCATCTTTTATGAGCCTAAGCAAAAATTGCCTTGACACTGTAAACTTCAGTTATCTACCAAGTTAGTATAGA
AGATGAATAACTTTCAAAACTGTGGAAGCTGCAAGACGATCCAAAATATTCCTGGAAATATCCTAGTTCCTGAATGAAGTGCTACAATGCTACATTCAAC
ACTCACAAAATGAAAGCAAGAGAGAACAATGCCACAAGAGCCATAGAGTTTCATTCTATACAGACTAAATCAGTATATGGACAAAATTACCATGTTACAA
CTCAGGATTATCAAAACAAATTACCATGTTACAACTATTATACAGACTAAATCAGTATATGGACGTCTATATCATTTGATAATTACAATTTCCAACATCA
GAGGGAAGCTTAATGAACACACAAATTACAAGATGACACCAAACCAACATACAAGAGGGCCAATCATATGTTGAAATGAACCCATAGCCTAGCTAGTTAT
GGAACAGTACAAGCCCATATGTAAAGGATACTATTGGAGATGCAAACTGGACCAAGTAGAAATCAAATACTGCTACTGAGAACTCCTCCATGGTTCATAA
AGCAATTGTTTCTACTCAGAAGAAACTTCAACCAATGGCTTTATAATGTTGAGGTCCATAAATGTTCTTGAAATAAATCTTCAAATTAATTTCACCCAAA
GTAGTCAAAAGATTTCAGAATCACCTTCACAACCTTGTAATATTGTTCGAAAGAAGTAACTGCCAAATGAATCATCTACCACAGAAACTTTAGGATGTGT
CTTCTTAGTTACTACATAACCACCCTCACAGCAAGTTAATAACTGACTGATATAGCTTTTCCGGAAGTAAACAAGTTAACATCAAATTCTCGGAGAACTA
TGGCCATGTCTATGTTCTGACAAGACAACCATAAAAGCGCAGCAGGATGGACTTAAATAACCAGAGTTTTCCAAGCAGACAAATGGCCTCCAAATAATAT
CAATCTCACTTGTTATTTTGACCCAAAAGCGTAGCAGCAGTCTTGAATGGAATGGAGAAAACATCTTATACACCAAAGACTATTCCTAACAATGACCAAT
CCCATACAACAAGCTTCAATTTCTCTGGTTTATAAATGTTCGTATTACAAATAAAATGTTCTTGGACAGTTGCTTGTAATGGAAGCAAACCAACTGCACA
ATATTGACATATTGAAATTTCAATAAATTGCAATTAACCATAGCCCTAAACCAAAGCATCAAGATTCCTAAAACTAACACCAGTAAACAGGGAAATCACG
AGATCTGTACCTCAAACTGAGCAGGTCAAGCAGCAAGTAATCTGTAGTTCCTGTACTAGGATAAATTAATCCACAGGGAAGGCAGTCAAAAAGAGCTCCT
TAAATCCTCGCGAGAAATCCTGATGTTAAACTTTAACTAAGAACTGACACAGAAGAATCATTCCAACGCCCTAGTTTACCTCAAACTCGAGCACATAGTG
ACGATTTTTATCAAAGCCAAAAAGCAATACATGGTCCGGTTAAGATGACACCCAACCATATTCAAGATAATCTGAAGAGTATGTCTTGCCGAAATTGAAC
AAGTTAAAGCCGGTGATTTGAAAGCTCTGAACAGACCTTAAATTTTCTGATATGACTTGACCTTATCATAAAAATTACTAGATCCGAAGGAAAAACTGCA
TAGCTGCAAGCAGACGAACGGTCTCAAACAAAACCAAGCATCACGAACTTGAAAGGAACCGAAAAATAATCTGAGGCAAGTGAGCAATCCTAACCATGAC
CAATTCAGAGCGAAAACTTCAGTTCATCTAGCCTTTGATCAAGCCCAAAATATCCATGACAAATCCATCGCACCAAACATGAATTGACACAAACCAACCG
ATCGCGCATATTATACCCAACACAGCAAACCACAATTAGCCATAAACCAATCGAAAGAGATACTGTGTTCAGAAAACTAACACAACAGCAGAAGCAAATC
GCCGAAACTAGACCCCCCCCAAACCGAACGGATCAAGCACCAGAAAAGGACGAGCAAGCGGGCAATCTATCCGGCTAGTTGGTGCACCTGATCATCAATC
AACAAACGGCAGCGAACGAGGTGAGATCGAAACCGATTGATCCCTTACCTACCGACTTACCAGCCCACCCGCGGCGGAGGGGAAAAGGGGAAGAATGACC
GCGCGAGAAGAGGAAGGAAGCCATGGGACCATCCTCAACGAAGAAAAAGCAGCGAGGATCGGGCTGCATTTATAGAGGAGCGGAGAGGAGAACCACCGAG
GAGGAAACCGAGTCGGTGGGCTGGAGCCGGGTTGCGAGCGGAATCGGTGGTCGCCGCCTATTCTTGTCGCGGTCGGAGTCGGAGACGAGACTAGGCGATG
TTATC