Detailed information on CNT30555324


BLAST search results

BLAST vs Swiss-Prot:
sp|Q0IQF7|RS16_ORYSJ, E-value = 1e-81

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3043803Oryza glaberrimaPrunus dulcis37.626.3481.88138forward
CNT30365247Oryza glaberrimaSorghum bicolor71.1238.4490.04261forward
CNT30620437Oryza glaberrimaCajanus cajan38.4219.7883.69141forward
CNT30120766Oryza glaberrimaCitrus clementina34.8823.6681.25128forward
CNT30151249Oryza glaberrimaBrachypodium distachyon88.016290.4323forward
CNT30104226Oryza glaberrimaOryza rufipogon92.170.7199.7338forward

Expression of CNT30555324

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MSMSLKRDLPASRMGSNALRRSISGLISSIGTPFTLISPRPGLQ*

Sequence

>CNT30555324
CGACGAGTAGAGTGCGGTCATAGCGGGCAAAGATGTCCTTGACCTCCTTCTTGGACGCCTCGTCGACGTACTTCTGGTAGTAGGCGACGAGGGCCTTGGC
GATGGCCTGGCGGATCGCGTAGATCTGCGACGTCTTCCCTCCGCCGCGGACGCGGATCCTCATGTCGATGTCCTTGAAGCGTGACCTCCCCGCGAGCAGG
ATGGGCTCGAACGCCTTGAGGCGGAGCATCTCCGGCCTGATCAGCTCGATCGGGACGCCGTTCACCTTGATCAGCCCGCGCCCCGGCTTGCAGTAGGAGA
CGGCCACCGCCGTCTTCTTGCGCCCGAAGCACTGGACTGTGCCTGGCGGCGGCTTGGTGCGGGAGAG