CANTATAdb - search

Detailed information on CNT30555269

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30106800	Oryza glaberrima	Oryza longistaminata	25.24	21.25	99.61	258	forward

Expression of CNT30555269

Peptides detected in this lncRNA

>peptide 1 (65 aa)
SSLVDEEKKHGSEGGRRKMEMSGGWLFCWLQVMLCGSFFVSKERERRVVVGWFYTRERERRGGPH*

>peptide 2 (32 aa)
MEIGEELRAPAMIIYRLFTRDPCQHILLLRID*

Sequence

>CNT30555269
AAAGCTCTCTTGTTGATGAAGAGAAGAAGCACGGGAGCGAGGGAGGGAGGAGGAAGATGGAGATGAGCGGGGGCTGGTTGTTTTGCTGGTTGCAGGTGAT
GCTTTGTGGGAGCTTTTTCGTGAGCAAGGAGAGAGAGAGGAGGGTGGTGGTTGGTTGGTTTTATACGAGGGAGAGGGAGAGGAGGGGAGGGCCCCATTGA
CCCGGATCCCTCTGGGCCATTTGACCGAGTTGGTGCGATGAGACGAGAGGAGGAGCGGAGGTTGGTTGAGTGGCTGCCATTTGCAAAGGCCCTCCCCCCA
CGGGGCTGGATTTGGTAGTTCGATTTGTTTTTGGAAATGGGATTGTTGGTTGTACCCGGTGAGTGTACCAGATGCGTGAGTTGGGCGCGCATAGGAGGGG
ACACGAGCTAGCCCAAGGTTTTCAATTGGTCCAAGGGATTGCTGTTGCTTGATGGAAGAAAAAGTCTGAGTTGGAAACAAACTTCAATGGCTCAACACCC
ACTTCCACGTTAGTAGATTTTTTGGGGCACACATCAGCAGCACATGGCGATGCTTAATGGGCTCACCCACCGACATTTTTCTAGCACCCCACGCTAGCTC
CCCCTCCTTTCTGAGATTCTAGAAAACCCAGCAGCATGTCTTTGTGTGTGATTGTGCAAGAAAGAAAGCAAAGAAAGGGAAAGGGTGAAGCAAGAAAGGG
GAGAATCTGATCAATTTGATAAGAAATGCTCCAAAACATGATGCAGATCTACTGATGAGAAGAAGAGGAGGCAAGGCAAATTGATGGAGATTGGAGAGGA
GTTGAGGGCACCCGCAATGATTATCTATAGGCTCTTTACAAGAGATCCATGTCAGCATATTTTACTACTTAGAATAGATTAAATGAAGAGAGAGAGAGAG
CAAAGCTATCTACTAACCTAGAGATAGTCTATAGAGAAAAACGAGGCAATGGATTAGAGAGCTATAGATACCCATGCAAACATACTATTGAGTTGGTTTA
CTATTAATCTAGTCTATTGCTG