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Detailed information on CNT30555034


BLAST search results

BLAST vs Swiss-Prot:
sp|P12330|CB21_ORYSJ, E-value = 9e-111

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30522718Oryza glaberrimaSetaria italica21.6330.9495.18228forward
CNT30441194Oryza glaberrimaAegilops tauschii54.8460.7190.31578forward
CNT30345519Oryza glaberrimaEragrostis tef33.360.5290.6351forward
CNT30371011Oryza glaberrimaOryza glumipatula61.86100.3198.77652forward
CNT30582932Oryza glaberrimaEchinochloa crusgalli55.9865.5688.14590forward

Expression of CNT30555034

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MAWTKKPNMENMARRPFLISFTLSSANASGSSARPSGLGLPR*

>peptide 2 (44 aa)
YCIRKFKVLINPSMPQYKQFNYIFTLYIARNGYILGSREYLFLI*

Sequence

>CNT30555034
TATTGTATACGTAAATTTAAAGTACTAATTAATCCTTCCATGCCACAATATAAACAATTTAACTACATATTTACACTATACATAGCCAGAAATGGTTATA
TTTTGGGATCGAGGGAGTATTTGTTTCTGATCTAATAGAGATGAGAAATCCGCTAATCAGAATAACACCACGGATAAGTACCTAGACCATTAGTTGGGAA
ACAAATAAAATCATTATTGCAAAAACATCATCTTCTTCTTCATCTTCTTAGTGTACACAACACCAACTCGATCATCATCTCGTCGCACTAAACCCATCTT
CCCCAACCCAAAGACAACGAACTCGCTGGCCACAAATCCATCCAACCACAATTAACCACTGCTAAGCTACGGTGCCCCACTTCACTTGCCGGGGACGAAG
TTGGTGGCGTACGCCCAGGCGTTGTTGTTGACGGGGTCGGCGAGGTGGTCGGCGAGGTTCTCGAGGGGGCCCTTGCCGGTGACGATGGCCTGGACGAAGA
AGCCGAACATGGAGAACATGGCGAGGCGGCCGTTCTTGATCTCCTTCACCTTGAGCTCCGCGAACGCCTCGGGGTCGTCGGCGAGGCCGAGCGGGCTCGG
GTTGCCGAGGTAGTCGAGCCCGCCCTCGCTGAAGATCTGCGAGCCCGCCTTGAACCACACGGCCTCGCCGAACTTGACGCCGTTCCGGGCGAGGAGCTCC
GGGAAGACGCAGCCGAGCGCGCCCAGCATCGCCCACCGGGAGTGGATCACCTCCAGCTCCCGGTTCTTGGCGAACGTCTCCGGGTCGGCGGAGAGCCCCG
CGGTGTCCCACCCGTAGCTCGGCGGCTCGCCGGAGAGCGGGCCGAGGTAGAGGACGCGGTCGGCGCCGTACCACGGGCTCCCCGACGACGCCGCCGGCTT
GGGCTTCGCGGCGGTCTTGCGCATGGTGATCCGCGCCTCGCCGAAGAGCGCGGAGGAGAGCGCCATGGTGGCCGCGGCCATTGATGCAGTGAGCTGTGAG
AGCTGAGAGAGATGGCGATGAGCGAGCGAGTGTGAGTTGGGAGTTGGAGATGGC