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Detailed information on CNT30554862


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30188045Oryza glaberrimaSecale cereale20.8313.3187.37190forward
CNT30117581Oryza glaberrimaOryza nivara82.1347.2399.33749forward

Expression of CNT30554862

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MFWQSVWSLASTEAWSGPREADLRHPLPPVPLPHAAVQL

>peptide 2 (57 aa)
MSRRRRRRQRTSWRSWRRRCSGRASGAWRRRRRGAGRGRRISATHFPQCRCRTPRYSF

Sequence

>CNT30554862
TAAATAATAATAGTAGTAGTAGTAGAGGTAATTCACATTACAAGTTCTTATAACACGCTAATAATATTACAAGACATAATAATAATAATAATAATAATGC
TACTACTACTGTTTACAACCTGTAAGATCAGCAGTAGAAGGTAATAACAGACTTTAGAAGAGCAATGGACGCCACGGCCGGAGTAACTGACCAGTGACCG
GCCACCGGAGACGCACGCCGGACACAAAAACGCCGGCTGCCGGTAGCATCGGCGTCTCCGGTTGAGGAAGAACACCAACCAACCCTAGCATCTACAGAGG
AAACAAGTCCGGAGAGAGATCGATCTACGTACACAAACGAACCAAACCAAAAGGATTAGGGACTTAAAAACTGCTAATCCATGCCCGTCCGTGCGGTGCA
GAATGTCTAAAATCCCATCTGCACGGCGGCGGCGGCGGCGACGATTAGGCTAACGACGGCGTGAGTACTAGCCAAGAAGTGGTGGTAGTGTTAATTGGCG
GCGAGGAGGGAGTCCCAGTCGATCTCGTAGGACGGGTACTTGGTGAGGGCGAAGGCGGCGGCCTCGTCCCACGGCGCCTCGCTGAAGTCGAGCTGCTGCA
TCTCCGGCACGGTCGCCGGCGTCTCGGCCGTGGTGGCGGCGGAGGACGGCGACAGGGAGGGCGACGAGTCGGCGGACTCCAGGCAGGACGACGCGTCGTC
GGAGGACGGCGACGAGCAGTTGCTGGTGGGCGCGGAGGATGTCGCGGCGGCGGAGGCGGAGACAGAGGACTTCTTGGCGTTCTTGGCGGCGGCGATGTTC
TGGCAGAGCGTCTGGAGCTTGGCGTCGACGGAGGCGTGGAGCGGGCCGCGGGAGGCGGATCTCCGCCACCCACTTCCCCCAGTGCCGCTGCCGCACGCCG
CGGTACAGCTTC