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Detailed information on CNT30554655


BLAST search results

BLAST vs Swiss-Prot:
sp|P36213|PSAD_HORVU, E-value = 8e-97

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695521Oryza glaberrimaOryza sativa75.6686.4299.4662forward
CNT30678303Oryza glaberrimaSetaria viridis22.2954.7893.85195forward
CNT30522020Oryza glaberrimaSetaria italica32.3459.794.7283forward
CNT30639185Oryza glaberrimaNymphaea colorata35.4372.683.87310forward
CNT30515273Oryza glaberrimaJuglans regia31.7743.3780.22278forward
CNT30525887Oryza glaberrimaPhaseolus vulgaris10.6324.8786.0293forward
CNT30630495Oryza glaberrimaVigna unguiculata34.1752.7381.61299forward
CNT30710333Oryza glaberrimaGlycine max36.2336.4482.65317forward
CNT30122581Oryza glaberrimaPhyscomitrium patens18.0622.4182.28158forward
CNT30299532Oryza glaberrimaTriticum aestivum26.6345.6994.85233forward
CNT30395090Oryza glaberrimaTriticum turgidum50.8641.492.13445forward
CNT3089114Oryza glaberrimaVigna radiata31.3128.4881.75274forward
CNT30440464Oryza glaberrimaAegilops tauschii50.8653.6192.58445forward
CNT30246994Oryza glaberrimaAvena sativa48.6951.0292.96426forward
CNT30665756Oryza glaberrimaTriticum dicoccoides41.7151.4192.88365forward
CNT30446699Oryza glaberrimaSaccharum spontaneum29.0328.3292.52254forward
CNT30971Oryza glaberrimaZea mays33.8351.9392.23296forward
CNT30228866Oryza glaberrimaAnanas comosus26.8626.8988.09235forward
CNT30651308Oryza glaberrimaRosa chinensis19.7730.0380.35173forward
CNT30344027Oryza glaberrimaEragrostis tef45.8349.6393.52401forward
CNT30361538Oryza glaberrimaSorghum bicolor30.6355.2692.16268forward
CNT30619829Oryza glaberrimaCajanus cajan36.2332.1584.23317forward
CNT30596794Oryza glaberrimaOryza meridionalis55.8973.7697.96489forward
CNT30356274Oryza glaberrimaLactuca sativa36.3448.7778.93318forward
CNT30370923Oryza glaberrimaOryza glumipatula75.3178.1799.39659forward
CNT3035037Oryza glaberrimaCucumis melo10.8631.6786.3295forward
CNT30148662Oryza glaberrimaBrachypodium distachyon36.3441.390.57318forward
CNT30577567Oryza glaberrimaOryza barthii82.1783.31100719forward
CNT30579362Oryza glaberrimaEchinochloa crusgalli49.3749.5493.52432forward
CNT30499040Oryza glaberrimaDigitaria exilis2430.8890.95210forward
CNT30117304Oryza glaberrimaOryza nivara86.9784.1899.87761forward
CNT30174623Oryza glaberrimaVigna angularis29.630.481.08259forward
CNT30558912Oryza glaberrimaPanicum hallii7.6626.0795.5267forward
CNT30113105Oryza glaberrimaFicus carica36.1139.587.34316forward
CNT3049718Oryza glaberrimaCucumis sativus22.0636.9780.83193forward

Expression of CNT30554655

Peptides detected in this lncRNA

>peptide 1 (41 aa)
MAMVVGGGERSVPCGGFDSSGVVWRRWSREKPKKKRGEMGEE

>peptide 2 (37 aa)
MSKTFLPVNLTSMGLTFLPMLRKFWPTPCLPALTFSG*

>peptide 3 (33 aa)
TLMNTHQNSPNIYYNIIRRDYIPPSIDYTIINN*

>peptide 4 (32 aa)
HVNEHASKFTKHILQYYKKRLYPTIDRLHHHQ*

Sequence

>CNT30554655
ACACGTTAATGAACACGCATCAAAATTCACCAAACATATACTACAATATTATAAGAAGAGATTATATCCCACCATCGATCGATTACACCATCATCAATAA
CTGAAGAGCAGCCTGACAGATGATTAAAATTACATGTCCATCCACCCAAAACACAAGTAATTAATAGGTCGATTATGAGAGAAGAAGAAGAAGGAGAAGT
CTAGATGTCGAAGACGTTCTTGCCGGTGAACTTGACCTCGATGGGGCTGACGTTCTTGCCGATGCTGCGGAAGTTCTGGCCGACGCCCTGCCTGCCGGCG
TTGACCTTCTCCGGGTAGACGCCGTCCTTGGGGTGGAGGTACTGCACCTCGCCATTGGGGAAGACGCGGTAGAACTGGTAGTTGATCTTGTACTTGGAGC
GGAGCCTGGTGCCCAGGGCCAGGCACTGCTCCTTCCTGGCCAGCTTCAGCAGGTTGGGGCCCTCGCGCATGATGGCGGCGCCGCCCGTGGGCATCTCGAA
CACCTGCTCCTTGGGCGACGTCCATGTGATGACGTAGAACTCCTCCACCTGCGCCTTCCGGAGGAGTCCCCCCGTGCTCCCGCCGAAGATCGGGGACGGC
GTGTTGGGGTCCAGCTGCGGCGGCACGAACCCCGCGGGGGCTGGCTTCTTCTCCTCCGTCGCCGCCGCGGCGGGCTGATCCTCCGCCGCCGCTCTGAGGG
AGGTGGGTGCCCTCGAGGTGGCACTTGGCGGCGGAGGCTTGCGTGGCCATGGCCATGGTGGTCGGAGGAGGAGAGAGGAGTGTACCGTGTGGTGGATTCG
ATTCGAGTGGTGTGGTGTGGAGGAGATGGAGTAGAGAAAAGCCCAAGAAGAAGAGAGGGGAAATGGGTGAGGAAG