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Detailed information on CNT3055427


BLAST search results

BLAST vs Swiss-Prot:
sp|Q70XV2|NU4C_AMBTC, E-value = 4e-147

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30381120Amborella trichopodaManihot esculenta5.5161.2984.21152forward
CNT30196709Amborella trichopodaPisum sativum29.6746.478.88819forward
CNT30184264Amborella trichopodaSecale cereale25.3340.8882.55699forward
CNT30221821Amborella trichopodaHordeum vulgare23.1951.3680.94640forward
CNT30394664Amborella trichopodaTriticum turgidum15.5444.2784.38429forward
CNT30258499Amborella trichopodaAvena sativa7.3967.5580.39204forward
CNT30610707Amborella trichopodaGossypium raimondii9.8271.585.24271forward
CNT30231113Amborella trichopodaAnanas comosus14.8654.386.34410forward
CNT30434219Amborella trichopodaPapaver somniferum9.270.3690.94254forward
CNT30585663Amborella trichopodaEchinochloa crusgalli9.643.5181.89265forward

Expression of CNT3055427

Peptides detected in this lncRNA

>peptide 1 (43 aa)
NQSLHSANSTIVALIGFLIIWICYFGVNLLGIGLHSYGSFSLR*

>peptide 2 (93 aa)
MRVNIISIAITIIISILGMKRYFGLVIIPKKTKNSATKPLIPGDAREGIEKILNIVSINNSYLFVEIKISYSNVTCSCQEKMCSTNKSMRNYL*

>peptide 3 (32 aa)
MMKKSKRSREEMILFDRYTFLKSRNEIITNFK*

>peptide 4 (36 aa)
MGKRRIVVSQGKLFMVKTRYTLIRKTRARNKIIDFI*

>peptide 5 (33 aa)
MLPFLIRFQSKAYIYCNAPLHEYLVTMYVGYNR*

Sequence

>CNT3055427
AAATCAAAGCTTGCATAGTGCGAATTCAACAATTGTCGCTTTGATAGGATTTCTTATCATTTGGATATGCTATTTTGGGGTCAATCTATTAGGAATAGGC
CTACATAGTTATGGTTCATTCTCATTAAGGTAAAGATCCAATTAAGAACTTGAGAATTGATCTTGAAGAAACGATCTAAATAATACATATAAAGAACAAC
GCCCTATGTCCTATTAGAATATAAAAATATAATAAATAGAATAGAAATAAATAGAAAATTCGTGCGATTTTTTTAAAGTAATTCCAATCAATAATTGATT
CGAATTATTCTAAAAACCCCAGATGTACCTAATTAAAATTCCCCTTTTGTTAACTTTCTTTTTTAGAAGAAAAAGCAAATAAAAATTATAGAATACTTCT
TTTCTTTTTCCATTATCCAGCAAAGGATTCAATAAAAGAAACTTTCAAAGAAAAAAATTATTTGATTTTTTATGCTATCTATTAAAGTGATTTGCTAAAG
TAGTTTCTACTTTATCAACTAATAGTATAAGAACGAAATCAGGATAAATACCAATACCTATTACAAATAGAAGGATAGAGACTAAACTAAATATCTCTTG
TGGTCCAGAATCCACAAAGTAAGAATTTGGAACATTGAATAGTTTGTATCCATAGAACATTTGGCGTGACATAGATGATAAATAAATGAGAGTTAATATC
ATTTCAATTGCCATTACAATAATAATTAGTATTTTGGGGATGAAAAGATATTTTGGGCTGGTAATTATTCCCAAAAAGACCAAAAATTCAGCAACAAAAC
CACTCATTCCTGGCGATGCGAGAGAGGGCATCGAAAAGATACTGAATATAGTAAGTATTAACAATTCCTACCTATTTGTTGAGATAAAGATATCGTATTC
TAACGTAACTTGTTCTTGCCAAGAAAAAATGTGTAGCACTAATAAATCCATGAGAAATTATTTGTAAAATGGATCCCTTGAGTGCCGTATCGGTCATGGA
ACCAATTCCTATGATCGTGGAACCCATATGAGATACAGAGGAACATGCTATTCTCTTTTTGAAATTGCGTTGGCCAAGAGAAGTTGAAGCTGCATAGATT
ATCTGAAGTGTTCCCACTATTACCAACCAAAGAGAAAATATAGAATGAGCATGGGGTAATAATTTCATATTGATCCGAACCAACCCATATGCTCCCATTT
TTAATAAGATTCCAGTCAAAAGCATATATTTACTGTAATGCACCTCTCCATGAGTATCTGGTAACCATGTATGTAGGATATAATCGGTGATTTGGCAGCA
TAAGCAATAAGGAAGCCAACATAGAAAAGGATTTCCAATCCCACAGGGATACGATTGATTGGCTGATGTTTCAAAATTCAACAGTGATTGATTGGAACTA
TATAGGCTCATACCCATAACTCCTATTAAGAGAAAAATAGAACCTCCTGTGGTGTACAAAATGAATTTTACAGCTGAATATAGACGGGTTTTTCCTCCCC
ACATCGATAAAAGTAAGTAAACATGAATTAATTTGAACTCCCACATGATGAAAAAAAGTAAAAGGTCCCGAGAAGAAATGATCCTATTTGACCGCTATAC
ATTTCTAAAATCAAGAAATGAAATAATCACGAATTTCAAGTAACTGGCTAAGCCGCTGAAGTAGCTAAAGTAATGATGAATCCCGTCAATAAAATGGGAC
CTATGGAAAGTCCATCAATTCCAAGTTTCTTGTGAAAATAAGAAAGATTTATCCAGTTACATTCATCTTCCAATTGGATTAATGGATCGTCCAATTGGAA
ATTATAATAAAATACATAGGTCATTAGGAGAAGTTCTAATAAGCATATACATATAGTATACCATCAAACCGCTTTATTTCCTCTCAAAGGTATATGCGGA
TATGGGCAAAAGAAGAATCGTTGTTAGCCAAGGAAAATTATTCATGGTAAAGACAAGATACACTTTGATCAGAAAAACTCGTGCTCGGAATAAAATAATA
GATTTTATCTAATCAAGTATGGGTTTTTATCAGTAAAGAGGAATAAAATGGATTCAAATGAAGTTTTCCATAAGGTATCAATAAGCTAGGCCCATGCTAC
GAGTGGTCTCATGCCATAAATAAACACGTACATTCAAGAAATCCATTGGACATGCGGATTCACATCTCTTACAACCTACACAGTCTTCTGTTCTTGGAGC
AGAAGCTATTTGTTTAGCTTTACATTTGTCACAAGGTATCATTTCCAATACATCCATGGGGCAGACTCGTACACATTGTGTACACCCTATATATGTATCA
TAAATCTTTACTAAATGTGACATTGGATTTATAAATTTTTGGAACATCAGAAATCTGCTCTCTAGTAGAATCAAATACTTAGTAAATGACTGATATATTA
TAGATACCAGACGAATCGATGTTTGTACCATAAATCATTTTTGTAATCCATTTCTGGGTCTGTTCATGAGATAGTGCCAAGATGCTTTGATACACTTCTA
TAGATCAGGTGATTCACATACATTTTGCTAATTAATTGAATCGACTAATTAGTCAAAAAATCAATGAAATTCTATAAACTAAAAAAATTTGATTTAATTT
AATAAATGAATCAATCGAATATTTGTTATTTTTTCATTGAATTTAGAAATTCAACGAATTTCTATTGAATTTTTCAATATTCATTGAATATTTCTAGTAT
AATTTATATTTCTTTTAGTTAGTTTAATATATAGATAATTTAGAGAAGATAATTTCTCAT