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Detailed information on CNT30554212


BLAST search results

BLAST vs Swiss-Prot:
sp|Q6ENG6|RBL_ORYNI, E-value = 0.0

BLAST vs NONCODE:
NONMEST005601, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690840Oryza glaberrimaOryza sativa35.5529.0399.931341forward
CNT30678279Oryza glaberrimaSetaria viridis9.2840.7995.43350forward
CNT3019929Oryza glaberrimaCitrullus lanatus6.5757.1490.32248forward
CNT30629265Oryza glaberrimaVigna unguiculata12.3841.2588.44467forward
CNT30201083Oryza glaberrimaPisum sativum25.1944.586.21950forward
CNT30182914Oryza glaberrimaSecale cereale37.8677.3192.931428forward
CNT30289813Oryza glaberrimaTriticum aestivum37.8672.1693.071428forward
CNT30225281Oryza glaberrimaHordeum vulgare8.5696.4295.67323forward
CNT30565170Oryza glaberrimaActinidia chinensis27.791.5188.91045forward
CNT3089355Oryza glaberrimaVigna radiata11.9675.6783.37451forward
CNT30541452Oryza glaberrimaBrassica napus30.0167.9187.371132forward
CNT30239038Oryza glaberrimaBrassica oleracea17.0751.6486.34644forward
CNT30146680Oryza glaberrimaMedicago truncatula8.7226.2686.93329forward
CNT30444217Oryza glaberrimaAegilops tauschii15.0110096.11566forward
CNT30258531Oryza glaberrimaAvena sativa15.7299.595.11593forward
CNT3060115Oryza glaberrimaArabidopsis lyrata21.5534.2987.21813forward
CNT30265852Oryza glaberrimaBrassica rapa2.5722.285.5797forward
CNT3017995Oryza glaberrimaZea mays40.5198.993.781528forward
CNT30606537Oryza glaberrimaGossypium raimondii10.1522.7882.51383forward
CNT30227829Oryza glaberrimaAnanas comosus4.4835.9686.98169forward
CNT30682029Oryza glaberrimaTriticum urartu27.0996.8796.091022forward
CNT30477828Oryza glaberrimaArabidopsis halleri9.9273.4888.5374forward
CNT30622174Oryza glaberrimaCajanus cajan4.1421.4386.54156forward
CNT30595572Oryza glaberrimaOryza meridionalis10.3145.3998.46389forward
CNT30355674Oryza glaberrimaLactuca sativa15.7280.3587.35593forward
CNT30369217Oryza glaberrimaOryza glumipatula9.0452.799.41341forward
CNT30480921Oryza glaberrimaChara braunii5.0124.8783.6189forward
CNT30434475Oryza glaberrimaPapaver somniferum8.2480.9989.39311forward
CNT3058691Oryza glaberrimaAmborella trichopoda8.0968.2387.87305forward
CNT30323704Oryza glaberrimaAsparagus officinalis7.7998.9992.18294forward
CNT30121217Oryza glaberrimaCitrus clementina22.0392.6487.12831forward
CNT30149719Oryza glaberrimaBrachypodium distachyon466.2395.36151forward
CNT30103728Oryza glaberrimaOryza rufipogon27.9490.8699.431054forward
CNT30578317Oryza glaberrimaOryza barthii7.961.5795.64298forward

Expression of CNT30554212

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MDYINNKKIAKKEKQLKRFDFSFPILAAFLSF*

>peptide 2 (31 aa)
MSSFLKESLRKGSNFQTLSFFIHSPLVFFSI*

>peptide 3 (30 aa)
MDKLHKRYIDYPPQQRARCDSIGLCNDQDW*

>peptide 4 (39 aa)
MRGKGGKIAYSIKGQILLPTTDLILPLRLCKAIYHPQRV*

>peptide 5 (42 aa)
MEFRESMILIIRSLLNVSTMGPDSIAVQSEMKDFSLLIGVVN*

>peptide 6 (35 aa)
MKTFSVNTAYLIPLSYDNTIFVFIYCIIPLYLLNI*

>peptide 7 (35 aa)
MRLFRIQNLFRLLPSTCNTYSTTLGPHKSAVRIDT*

>peptide 8 (29 aa)
MTLAFRRILVSCSEVLLVRPRAKMDYIRI*

>peptide 9 (31 aa)
MGGMLKLMNMFHSYNMFHSYIMGTPCVHSML*

>peptide 10 (44 aa)
MILCGNTLRKFGPVGSRQSYFSAHKEIKKPLQLPEILSLLKARK*

>peptide 11 (54 aa)
MKIPDDLSFSTNPRLVQRSPVSKTPRKNGLYKNIIPNIPPGAYSSIAIPNLFSL*

Sequence

>CNT30554212
CATATTAGATATACTAACAGCGGTCGATTGAAATTGAGAGAATAAGCTAAATGATTTTGACTTTACTTTTTTTGATTCTGAAATCGCCTTCGCCAACTAG
ATACTCCTGTAAAATAATTGGTTAGATACATTGACTTTCTATTCAAAAAGTATTTGTTGATCCACTTAAAAAAACTCGCTATACCCGGTTCCGCATATGC
ATGCATTTATGCTCGTAGCCTATATCCGCATCCATAATCCCCATCCATAGCGGGTTTGCATTTGTGTGTAGAAAGAGCCACATAACATACCATATTATAT
TACTTACACTACAAAAGATCCGTATTATGATCCTGTGTGGAAATACATTGAGAAAATTCGGTCCCGTCGGTTCTAGACAATCTTATTTTTCTGCACATAA
AGAAATAAAGAAGCCATTGCAATTGCCGGAAATACTAAGCCTACTAAAGGCACGAAAATAGAGGGTAAGTTAAAATCCATCATAGAATAGGTGTCTCCAT
TCAAATTTACTATTTCTATCTATTCGATTTGATCTATTCAAAAAATATCTTAAGATTCTTATGATATAATTAAGTATATCTATTATAACGAATATTGACT
ATTGTATTTTTGAGTTTGCAAAAAAAGATTTTTTATAGAATACTTTTTTTTAGAATACTAAAGTATTCTAAAAAAAAAGAATCGAATGGATTATATAAAT
AATAAGAAAATAGCAAAAAAGGAGAAGCAATTAAAAAGATTTGATTTTTCTTTTCCGATCCTCGCGGCCTTTCTATCCTTCTAATCGAACTTGAAATTGG
ATTCAAAGTACGACTTAGTCGAATGCGCCTATTTCGAATCCAAAATCTTTTTCGTCTACTTCCTTCCACATGCAATACTTATTCAACCACTCTCGGACCC
CACAAATCCGCTGTAAGGATTGATACATAGGACTTTTAGTTGATTGATATTGCCGTAAAGTTGAAACTTTTTTAGGCTTTTTTATTAAACTGTAATTTCC
TCTCTGCATACGTGCTCTTCTAGAAGCATATACAATAATGCGCGGTAAAGGAGGGAAAATAGCATACTCAATCAAGGGACAAATTCTTTTACCTACTACA
GATCTCATACTACCCCTTAGACTTTGTAAGGCCATATACCACCCCCAAAGGGTATGAAAATACCGGATGACCTTAGCTTTTCGACGAATCCTCGTCTCGT
GCAGCGAAGTCCTGTTAGTAAGACCCCGCGCAAAAATGGATTATATAAGAATATAATTCCGAATATTCCTCCGGGTGCGTATAGTAGCATTGCGATTCCG
AATCTTTTTTCTTTGTGAATAGAAAAAATTCATTGTATCGTTGGGTCGGAGGTTTGCTCCAGAAAAATTCGGAACAAAACGTCTACCGCGTTGAAGCCCA
TAGCCCCATGGAGTTCCGCGAAAGTATGATTCTTATCATCAGGAGCCTTTTGAACGTCTCTACGATGGGTCCAGATTCTATAGCAGTCCAATCTGAAATG
AAAGACTTCTCGCTCTTGATCGGAGTCGTAAACTAAAACTACCTCTTCATCAAGGTTATAGAAAACTTCGTCATCTAGTTCTACCATTTTGAAAATCAAT
TCTCTTTTCTTACGAGCATTTCGAGTCACTTGTTGACTCACGATTGTGCCTGTTAAAAGTTTCAAAATGTCCTCTTTTTTGAAAGAGAGTCTTAGAAAGG
GGTCTAACTTCCAAACTCTGTCTTTTTTCATTCATTCTCCTTTAGTTTTTTTCTCTATCTAGAAGTGGAATAGAATAACCCGGTTAAAGGGTAATGATCA
TACGTCTGTAATGCATTGTATGTCATTGATTCTTTCCCAATAAATGAAAACTTTTTCTGTAAATACTGCGTATTTGATTCCATTATCATATGATAATACT
ATATTTGTATTTATTTATTGTATTATACCTTTATATCTTCTAAATATATAGAATAGAGGAATCCCGATTTGTCAAGTCTCATGATCGTATCAAAATCTAT
TTAAACTCGGCTCAATCTGAAAAAAGATTGAGCCGAGTTTAATTGCAATCAATTAGAAGAAAAAAGAAGAATTACTGCATTTTCGTAACTGATTTTTGAT
CTTTCTATTTCTCTTCTTTTTTATTTAGACCTTTTTTCTATCTAATTTTATCCACTTAGTCTAGCTATCTAGTTTATCTACCGGCTCGAACTCGAATTTG
ATCGCTTTCCATATTTCACAAGCTGCGGCTAGTTCAGGACTCCATTTGCAAGCTGATCGGATAATTTCATTACCTTCACGAGCAAGATCGCGCCCTTCGT
TACGAGCTTGTACACAGGCTTCTAAAGCCACCCGATTAGCTGCTGCACCAGTCCTGAGTGAAAAAGATACCGCGAGCACGATCTTTTTCAATAAAATCAT
CGCGCAATAAATCAACAAAACCTAAAGTCATTTCGCGTTCCCCTTCTAACTTACCTACTACTGTACCAGCGTGGATATGATCTCCCCCAGACATACGCAA
TGCTTTAGCTAATACACGGAAATGCATACCATGATTTTTCTGTCTATCAATAACTGCATGCATTGCTCGGTGAATGTGAAGAAGTAGGCCGTTGTCGCGG
CAATAATGAGCCAAACTAGTATTTGCGGTGAATCCCCCGGTTAAGTAGTCATGCATTACAATAGGAACCCCTAATTCCCTCGCAAATACAGCTCTTTTAA
TCATTTCTTCGCATGTACCTGCAGTCGCATTCAAGTAATGCCCCTTAATTTCACCGGTTTCGGCCTGTGATTTATAAATAGCTTCGGCACAAAAGACAAA
ACGGTCCCTCCAACGCATAAATGGTTGTGAGTTTACGTTTTCATCATCTTTGGTAAAATCAAGTCCACCGCGTAGACACTCATAACATGCTCTACCATAA
TTTTTTGCAGATAATCCCAATTTTGGTTTAATAGTACATCCCAATAAAGGACGACCGTATTTGTTCAACTTATCCCTTTCAACTTGGATACCATGAGGCG
GACCTTGGAAAGTTTTTGAATAAGTAGGGGGAATTCGCAGATCCTCCAGACGTAGAGCGCGTAGGGCTTTGAAACCAAATACGTTACCCACAATGGAAGT
AAACATGTTAGTAACAGAACCCTCTTCAAATAGGTCTAATGGATAAGCTACATAAGCGATATATTGATTATCCTCCCCAACAACGGGCTCGATGTGATAG
CATCGGCCTTTGTAACGATCAAGACTGGTAAGTCCATCAGTCCAAACAGTTGTCCATGTACCAGTAGAAGATTCGGCAGCTACTGCAGCCCCTGCTTCTT
CGGGCGGAACCCCCGGCTGAGGAGTTACTCGGAATGCTGCCAAGATATCAGTGTCCTTGGTTTCGTACTCCGGGGTGTAGTAAGTCAATTTATAATCCTT
AACACCAGCTTTAAATCCAACACTTGCTTTAGTTTCTGTTTGTGGTGACATACGTCCCTCCCTACAACTCATGAATTAAGAATTCTCACAACGACAGGGT
CTACTCGATATGGATTAGGCGTAAATGAAACCTTTGCAAAAATCTTAAAAAAAAGATATTCAATTAATATCAACTCATTAAAGAAAATGGGGGGCATGCT
TAAGTTAATGAATATGTTTCATTCATATAATATGTTTCATTCATATATAATGGGTACACCCTGTGTACATTCTATGCTATAGGAATTCTACTATAGGAAT
TCGATAAGAATTGAGTTGTTGTTATGGTAAGTTAACATGCTTCGTTATTAAACCATGGATTTGATTCACCAA