Detailed information on CNT30554166


BLAST search results

BLAST vs Swiss-Prot:
sp|Q6ENG7|ATPB_ORYNI, E-value = 2e-153

BLAST vs NONCODE:
NONOSAT000401, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30673496Oryza glaberrimaSetaria viridis9.1940.9395.4588forward
CNT30197557Oryza glaberrimaPisum sativum28.8117.8187.68276forward
CNT30710344Oryza glaberrimaGlycine max10.9622.1588.57105forward
CNT30224691Oryza glaberrimaHordeum vulgare15.6654.9598150forward
CNT30592630Oryza glaberrimaMusa acuminata17.1236.288.41164forward
CNT3082983Oryza glaberrimaBrassica juncea61.5924.5783.56590forward
CNT3018154Oryza glaberrimaZea mays71.46094.74684forward
CNT30596697Oryza glaberrimaOryza meridionalis18.2745.34100175forward
CNT30416813Oryza glaberrimaPapaver somniferum69.8329.9784.9669forward
CNT30104429Oryza glaberrimaOryza rufipogon62.5390.7699.5599forward
CNT30726985Oryza glaberrimaLupinus angustifolius62.9427.8886.07603forward

Expression of CNT30554166

Peptides detected in this lncRNA

>peptide 1 (37 aa)
NYSRFLHFHIKIISFTSPFPYSAKYGYAPVSFSNIVD*

>peptide 2 (64 aa)
MNRECCTSIYRTQIVNRLPKNVENSSKSSSTDRNTERSSRVNHFHSSHQPICSTHSYSSNSIIS*

>peptide 3 (28 aa)
MSPSESSINLFFIYILPFVNDLCLLYFLI

>peptide 4 (31 aa)
LLQIPSFPYKDHFLHESVPLLRQIRIRPREL*

Sequence

>CNT30554166
AATTACTCCAGATTCCTTCATTTCCATATAAAGATCATTTCCTTCACGAGTCCGTTCCCCTACTCCGCCAAATACGGATACGCCCCCGTGAGCTTTAGCA
ATATTGTTGATTAATTCCATGATGAGTACTGTTTTACCTACTCCAGCTCCCCCAAATAGTCCGATTTTTCCTCCACGCCGATAAGGAGCTAAAAGATCGA
CCACCTTAATACCAGTTTCAAAGATGGATAATTTCGTATCTAACTCGATAAAGGCGGGCGCGGATCTATGAATAGGGAATGTTGCACTAGTATCTACAGG
ACCCAAATTGTCAACAGGCTCCCCAAGAACGTTGAAAATTCGTCCAAGAGTAGCTCCACCGACAGGAACACTGAGAGGAGCTCCCGTGTCAATCACTTCC
ATTCCTCTCATCAACCCATCTGTAGCACTCATAGCTACAGCTCTAACTCGATTATTTCCTAATAATTGTTGTACCTCACAAGTTACATTAATTTGCTTAC
CGTCAGTGTCTCGACTCTTGACTACCAAAGCATTATAAATATAAGGTAACTTGCCCGGGGGAAAAGTGACATCCAGCACGGGTCCAATAATTTGATCGAT
ACGCCCTGTACTTTTTTCTTCAATTGTAGAAACCCCGGGACGAGAAGTAGTAGGATTGGTTCTCATAATTATCACATAATTTTCAAAAAAAAGGAATTTA
TCGAAATTTTGATTTTTTTCTTGTTGAATAATGCCAAATCAACACCAAAAAAATATCCAAAAATCCAAAAGTCAAAAGGAAATGAATTAGTTAATTCAAT
AAGAGAGAAAAGGGGACCAGCACTTGATTTCGTTGCCCAAACGAATCCCATTCAATCGTTTACTCATGGAATGAGTCCGTCGGAAAGTTCAATCAATCTT
TTTTTCATATACATTTTGCCTTTTGTAAACGATTTGTGCCTACTCTACTTTCTTATCT