Detailed information on CNT30553860


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693805Oryza glaberrimaOryza sativa42.4441.78100160forward
CNT30682490Oryza glaberrimaTriticum urartu17.7722.6488.0667forward
CNT30349660Oryza glaberrimaEragrostis tef21.2220.4191.2580forward
CNT30370213Oryza glaberrimaOryza glumipatula49.641.83100187forward
CNT30101793Oryza glaberrimaOryza rufipogon49.644.1100187forward
CNT30576573Oryza glaberrimaOryza barthii71.8898.1997.79271forward
CNT30116825Oryza glaberrimaOryza nivara49.632.86100187forward
CNT30556906Oryza glaberrimaPanicum hallii20.9513.6289.8779forward

Expression of CNT30553860

Peptides detected in this lncRNA

>peptide 1 (62 aa)
MMIDDPSKLARDPSNIDRHTHTLTTTTTIQLQEQQEQPLQLVPHLQVLQPQPPFSPLSTAISI

Sequence

>CNT30553860
GGTCAGTTTAACTTTGCAGAGTTTTCATTAGTGAAAAAACAACAATTTCCTCGTGGTAATTAGAACCAAAGGGAAATTAAACAAGGGCAGTAAGCAGTAA
GAGAAATGGGATGAAAGCAGAGGTAGATTATATTAAGAAGCCTGGCACGCATGAGGAGATGGAGCAGGAGTACATGATGAGATCACCATGATGATAGATG
ATCCATCCAAGCTAGCTAGGGATCCATCCAACATTGATCGACACACGCACACACTGACAACGACGACGACGATTCAGTTGCAGGAGCAGCAGGAGCAGCC
GCTGCAGCTGGTGCCACACTTGCAGGTGTTGCAGCCGCAGCCGCCGTTCTCGCCGCTCTCCACCGCCATCTCCATTC