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Detailed information on CNT30553355


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30370120Oryza glaberrimaOryza glumipatula77.7410099.23653forward
CNT30101314Oryza glaberrimaOryza rufipogon10093.3399.76840forward
CNT30576127Oryza glaberrimaOryza barthii10070.71100840forward

Expression of CNT30553355

Peptides detected in this lncRNA

>peptide 1 (64 aa)
MMSASVPPGGAPGHGGARGQGFAPCFCMAVVNRQQATDDGGGVEEEIRKEIMLGSLLEGARLGK*

>peptide 2 (32 aa)
MIVYEIFICWPKFQNRETIVYSKDLIACERLE*

Sequence

>CNT30553355
CGTGTCCTCTCTTCAGCCACACACGCGCCCACCTCGCCGATTTCTCCTCCACGCACGGGATGAACTCATGAAAGAGTGAGTAACCCGAGAAGCTGTCAGT
GAGAGAGAGAAGCCGTCGATGGGGGAGGAGGCGGCGAAGCGGCAGCAGCATCCGCGATGATGTCGGCGTCCGTTCCGCCGGGCGGAGCCCCTGGTCACGG
CGGAGCCCGCGGCCAAGGATTTGCGCCGTGTTTTTGCATGGCAGTGGTGAACCGACAACAAGCCACTGATGATGGAGGGGGAGTGGAAGAGGAGATAAGA
AAGGAAATAATGCTCGGAAGCCTACTAGAGGGTGCGCGATTGGGCAAATAAGCCTAGACATAGGGGCGTGTGTTTGGGCGAAATGCTTGCAGCTTGCGGG
GCAGCAGGAGGTGATTTTAGAGTTTGCTTCAAAAAATAAAAGTAAGTGATCATAATCTATTTGCTTGGTCATGTAGATAGAATCTTATAAAACTAGTTGA
TACCCCGCGCGTTGCTGCGGGCATAGAAGTACAATTATCAATGTGCAACATTAGTGCAAACAATCTAAATAAATTTGCTTATAATTTGCTGAGAATCTCT
TAATGATAGTTCTGATCCCACTGATGTATGATAGTATATGAAATCTTCATCTGCTGGCCGAAATTTCAAAATAGAGAAACAATAGTATACAGTAAAGATC
TGATTGCTTGTGAACGTTTAGAATGAAAGAAACAAAAGCCTAAAAAATTATATATTTATTAGGCATCATTACTATAATTCATAAAATTGTATGCTTCCAG
ATCATGGATTGCTGCATACCTTAGCAAAAATAAACCTTCA