Detailed information on CNT30553147


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT002948, E-value = 6e-79

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30496834Oryza glaberrimaDigitaria exilis23.292.2486.6775forward

Expression of CNT30553147

Peptides detected in this lncRNA

>peptide 1 (52 aa)
EANLQRTSGLSMLGLEQFGMGDRPGNSSRVHTSEDKVCRKDMCWSVRAVYDL*

Sequence

>CNT30553147
GGAGGCCAATCTCCAAAGAACTTCAGGGTTAAGCATGCTTGGCCTGGAGCAATTTGGGATGGGTGACCGACCGGGAAATTCTTCCCGGGTGCACACGAGT
GAGGACAAAGTGTGCAGAAAAGACATGTGTTGGTCTGTGAGGGCAGTCTATGACCTATGAAAGCTATCAGATGTAAGCGGGACGTTACACATACAATGTT
AACAATTGATTTATTTCATTAGAAGTTTCAAAAAATTATGAAAACTTGTTTCAAAAAATTATGAAAACTTTTACGTGGCCTCCTTATATAGGAAAAAGTA
CGAATTACCCCCTGAACTATCG