Detailed information on CNT30553137


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30291343Oryza glaberrimaTriticum aestivum102.0816.2988.98245reverse complement
CNT30225628Oryza glaberrimaHordeum vulgare34.1740.892.6882reverse complement
CNT30250642Oryza glaberrimaAvena sativa53.339.691.41128reverse complement
CNT30680889Oryza glaberrimaTriticum urartu102.0834.0888.57245forward
CNT30340274Oryza glaberrimaEragrostis tef102.583.6790.65246forward
CNT30148014Oryza glaberrimaBrachypodium distachyon43.3336.8896.15104reverse complement
CNT30575833Oryza glaberrimaOryza barthii10035.82100240reverse complement

Expression of CNT30553137

Peptides detected in this lncRNA

>peptide 1 (32 aa)
ISSSKTFTEEAEILLKEAIQEQLERFSLQEQT*

Sequence

>CNT30553137
TATATCTTCTAGCAAGACATTCACCGAGGAAGCGGAAATCCTTTTGAAGGAAGCTATTCAGGAACAACTCGAACGGTTTTCCCTTCAGGAACAAACATAA
ATTTTGCACGTCTACTCTTGTTAGTAGAAGTAGTAGAGGAGAAATCGTTGAGAAAGATTTTTCATTTGAATCATGCAAAAAAGTTTTCTTAGTTTTTAGT
ATAGTTATTTAAAGAATAGATAGAAATAAGATTGCGTCCA