Detailed information on CNT30552971


BLAST search results

BLAST vs Swiss-Prot:
sp|Q39176|ERLI1_ARATH, E-value = 1e-17

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692405Oryza glaberrimaOryza sativa57.2792.8695.77260forward
CNT30116237Oryza glaberrimaOryza nivara10078.1499.56454forward

Expression of CNT30552971

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MRLQHGCRGGVPSCTFISPFSTFAHTPSFSVSIGHLPPPPPPP

Sequence

>CNT30552971
TTAATCAATTATGCAGATACACATATACAAGTAGACGAATGAAGCATGCTTTAATTACGTCGTGGAACTGAATCATATGCATGCATATATATCTCATTAA
TTTACGGGATGAAGGAGGAAATTAAGGCACGCAGATACATATGATGATTTGAACAAGGAACAAATTAGACATAGATAGATATATAGTTGTACGTGGCCTG
GTGGTCGTTCTTCGTACGTTCTTGTGTGTAGCAAGCAGTGAAGTAGAATGGAGCAGCAGCTATATTAGTTGCTGCACTGGAAGCCGGAGGGGACGGAGCG
GCCGCAGTAGTCGGCGAGGCCCTGGATGAGGCTGCAACACGGCTGCCGCGGCGGCGTCCCCAGCTGCACGTTTATCAGCCCATTCAGCACGTTCGCGCAC
ACCCCCAGCTTCAGCGTGTCGATCGGGCATCTTCCTCCTCCCCCGCCGCCGCCG