Detailed information on CNT30552732


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30670750Oryza glaberrimaSetaria viridis16.0423.4893.5177forward
CNT30595781Oryza glaberrimaOryza meridionalis74.5873.9796.65358forward
CNT30100161Oryza glaberrimaOryza rufipogon100.8385.9795.04484forward
CNT30115946Oryza glaberrimaOryza nivara85.2171.594.13409forward
CNT30550530Oryza glaberrimaOryza brachyantha32.9221.8896.84158forward

Expression of CNT30552732

Peptides detected in this lncRNA

>peptide 1 (56 aa)
MCSACSEMATDRLPSPLALGSTKASPSYAMPPGPMNTGRPQPKSASERDSLKMSTAV

Sequence

>CNT30552732
CGAAGTAAACCACCGCGATTAACCTTATTAACCCTCTGTGTTTCGTAATGTTTACGGATTAATTAACTGTTCACAATACAAATACAGTTGGCACAAAATG
TGTCCTGCCCAAAAGCGGGAAGGCAGGAAGGGAAAAATTTGCAGGAACTAACGTGTGGAATCAAAGAATCGTTGCTGCATCCTACCGATGATAGGCTGTT
AAGAACCACCCCCGCCTCCTCTCCATGCATGTGCGCGTTCGTGCGTGCGTGCGTGTAGTTTGATTTCAGAGGATCAGAAGTCGAAGATCATCTTGCGGAA
CTTCTCCATGTGCTCGGCCTGCAGCGAGATGGCCACCGACAGGCTGCCGTCGCCGCTGGCGCTGGGGAGCACGAAGGCGAGCCCCTCGTACGCGATGCCG
CCGGGGCCCATGAACACCGGCCGCCCCCAACCGAAGTCGGCGTCGGAGCGGGACAGCTTGAAGATGTCCACGGCGGTGGG