Detailed information on CNT30552477


BLAST search results

BLAST vs Swiss-Prot:
sp|Q8L4L4|RL52_ORYSJ, E-value = 4e-13

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690402Oryza glaberrimaOryza sativa89.6771.0399.54434forward
CNT30369416Oryza glaberrimaOryza glumipatula83.2610098.76403forward
CNT30107443Oryza glaberrimaOryza longistaminata90.2955.2598.4437forward
CNT3099888Oryza glaberrimaOryza rufipogon89.4653.1399.54433forward
CNT30574818Oryza glaberrimaOryza barthii89.6760.1999.54434forward
CNT30115661Oryza glaberrimaOryza nivara95.6694.1194.82463forward

Expression of CNT30552477

Sequence

>CNT30552477
CAGTTTAGGACAATGCAGGCAAGAAGACCTGAAGATTGACTGCCCGTTGCTAAAAAGGAAAAAGTAACATAAAACACTGACAAGTGAAGAGCCAGGCAGA
ACACATTTTGATCAATATCCAAACGGCAGCTTCTCACATAAATAAGATAACCGATAGCTCCAGGTTGAGAATCAAAAACCGAAAGAAATAGGTTCTTTGA
GCAGAGTGCAGAACATAAACAAAAATGCCTGTTGCAAATTGCAAGACTACAGGTAAACTTAAATGCCATATGGAGTTTGTTTGGCAGCATAAGATGAAAC
TACTGTGATAAGGCTACTCTCTCACTCGTCATCCTCTTCCTCGTCATCATCATCAGCACCAGCTGAGGAGTTGAGAGCATTCAATCTTTCGATGAGACTG
GCCTTCCTCTGCTCGTAGGTCAGCTTCTTGAGGTACTCACTAAAGTGGGCTTGGAATTTCTCAGGTTCCTCCTCAGCCATAGAC