Detailed information on CNT30552437


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672671Oryza glaberrimaSetaria viridis22.2723.2190.4394forward
CNT30520803Oryza glaberrimaSetaria italica22.2721.2291.4994forward
CNT30286278Oryza glaberrimaTriticum aestivum20.1429.1189.4185forward
CNT30383152Oryza glaberrimaTriticum turgidum20.1413.689.4185forward
CNT30241870Oryza glaberrimaAvena sativa19.6720.8589.1683forward
CNT30655558Oryza glaberrimaTriticum dicoccoides20.1422.3789.4185forward
CNT3015104Oryza glaberrimaZea mays20.3826.0689.5386forward
CNT30678966Oryza glaberrimaTriticum urartu20.1416.5789.4185forward
CNT30719808Oryza glaberrimaTriticum spelta20.1419.9589.4185forward
CNT30595633Oryza glaberrimaOryza meridionalis53.0868.9297.77224forward
CNT30148777Oryza glaberrimaBrachypodium distachyon20.859.8890.9188forward
CNT3099956Oryza glaberrimaOryza rufipogon10039.3799.29422forward
CNT30574749Oryza glaberrimaOryza barthii89.57100100378forward
CNT30115687Oryza glaberrimaOryza nivara98.3493.4799.28415forward

Expression of CNT30552437

Sequence

>CNT30552437
GGATTAGAATTACGTACTCTCTCGATCATATATAGCCTCTGCTTGCATGCGGCAGGAGTATAGTATATAGTTAAGACAAAGAAAATGTATATAAATAAGA
TTTTGCGATTATGTAAGGAATTTTATTTAGGGGCCAGGCGGCAACATGACATACATGAGACGCTAAGGTAGCTAGTACATGGCATATGTAGTGGTACTGG
TAGCTCGTTGATCAGGTGATGAATTGGATGGAGATAAGTTTCTTCTAGTTGCAGTTGCAGCAGGAGCAGCCGCAGCTGGTGCCGCACTTGCAGCTGGAGC
CGCATCCGCAGTTGCCACCGCAGCACGACATGGTGATGATGATGAGAGCTTCTTCTTCCTTCTCTGGCCTTGTCGGCAACTAGCTGCTGCTTACTTGTAT
GGAGCTTCTCAGTTGCTGGCCT