Detailed information on CNT30552300


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690471Oryza glaberrimaOryza sativa35.6289.6699.57234forward
CNT30523073Oryza glaberrimaSetaria italica20.418.6985.07134forward
CNT30455220Oryza glaberrimaSaccharum spontaneum20.0917.3586.36132forward
CNT30363793Oryza glaberrimaSorghum bicolor20.0927.7984.85132forward
CNT30595494Oryza glaberrimaOryza meridionalis91.1791.5990.82599forward
CNT30369446Oryza glaberrimaOryza glumipatula86.6195.4796.13569forward
CNT3099710Oryza glaberrimaOryza rufipogon96.9610097.65637forward
CNT30574837Oryza glaberrimaOryza barthii90.11100.3499.66592forward
CNT30497518Oryza glaberrimaDigitaria exilis19.7920.9784.62130forward
CNT30115618Oryza glaberrimaOryza nivara59.5175.3495.65391forward
CNT30557683Oryza glaberrimaPanicum hallii20.0936.5785.61132forward

Expression of CNT30552300

Sequence

>CNT30552300
CTTCTTGCTTAATTAATGTTGCATACGAACTGAAACTTTATACTCCAGACTAATCACTATCACACTATCAGAGAGATTCAGAACAGTGATCGACCGGTGA
TAATTAGGACAAGCTTTATTATATTCAGGTCACGAATTTATTTTTCATACACCCCCCTCTCTGTTCGTAGTGATCGCACAGAGAAGAAGGTGCTAATTAG
CTAAGCTCCGTGTACGCACGTACACACGCACGCACGATATACACGTAGAGCTAAGCCACCACATGACCACCACGACTACGTACGGGCACACATATACGTA
CGTACGTACACGGGTACACACAGCAGGTTCGATCAGTCGGACTTGAGCAGGAAGCTCTGCTTGCGCTCGCGGAACTCGCCGGTGCAGGTGTAGTCGTTGC
CGTGGTTGTGGTTGTGGTTGTGGTGGTGGCGGCCGGAGCCGGACCTGTCGATCTCCTGGAACGTCTCCTTGACGACGTGCTGCTGCTGCACGCCGCCGCG
GCCGAGGAAGCCGCCGGTGGGGGTCACCGACCTCACCTCCTCCGAGCAGTAGTCCACCTCCTGGTAGTGAGCCATTGTTTTTTAGTTGGGGAGTGAGGTG
AGGTGGTGTTGTGATGAGCGAGAGATGGTTAATTAGGGTTTTGGTGGTGTACGGGAT