Detailed information on CNT30552282


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690797Oryza glaberrimaOryza sativa37.9926.32100215forward
CNT3066731Oryza glaberrimaLeersia perrieri26.6823.4593.38151forward
CNT30369445Oryza glaberrimaOryza glumipatula36.043499.51204forward
CNT3099999Oryza glaberrimaOryza rufipogon37.8127.97100214forward
CNT30574614Oryza glaberrimaOryza barthii48.7647.18100276forward

Expression of CNT30552282

Peptides detected in this lncRNA

>peptide 1 (91 aa)
MQRRALHRAHYPRSSGDAAGDGEVSHGFLACLSAAAGEPGMPPPGVEPLLPGRLNPGMLLPGMPPNAGTALPKRSNGGNVVGCTTVSLLSAA

Sequence

>CNT30552282
TAACACAATAATGATCACATTTAGCATTATTCATGCCTCGAGCTCGAAACAGTGGTAGTAATACTACATGATCACGAACTTAATTAAAACACAAAATATA
AGAAGGGACCTAATTAAAACAAACAAACACAACCAACCAACAAACAGATAGAATAATCCTCCTCCAAATGCATGTAAAGAAAAGAGATAGAAGAGACACT
ACTCATAATAGAACGCTAGCTAGACACAGTGCAAGCTAACTGCACATATGAAGATATAACGCGCGCGCGTCATATAGCCATCCATATTGCATGCAACGCC
GTGCGCTACATAGAGCACATTACCCGCGCAGCAGCGGCGACGCCGCCGGCGACGGCGAGGTCTCTCATGGCTTCTTGGCCTGCTTGTCGGCGGCGGCGGG
GGAGCCGGGCATGCCGCCGCCGGGGGTGGAGCCGCTGCTGCCGGGGAGGCTGAACCCCGGGATGCTGCTGCCGGGCATGCCGCCGAACGCCGGCACCGCG
CTCCCGAAGCGGTCGAACGGCGGGAACGTCGTCGGCTGCACCACCGTGTCCTTGCTCTCCGCCGCC