Detailed information on CNT30552256


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONZMAT001310, E-value = 4e-135

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30674625Oryza glaberrimaSetaria viridis23.1721.1310060forward
CNT30307098Oryza glaberrimaTriticum aestivum10044.35100259reverse complement
CNT30221722Oryza glaberrimaHordeum vulgare10026.4399.23259forward
CNT30511396Oryza glaberrimaSolanum lycopersicum100.3928.4291.92260reverse complement
CNT30437708Oryza glaberrimaAegilops tauschii77.2264.199200forward
CNT30257732Oryza glaberrimaAvena sativa70.2766.91100182forward
CNT30266045Oryza glaberrimaBrassica rapa65.2538.1597.63169reverse complement
CNT3067537Oryza glaberrimaLeersia perrieri34.7530.5192.2290forward
CNT30715515Oryza glaberrimaMalus domestica golden47.4961.1985.37123reverse complement
CNT30684661Oryza glaberrimaTriticum urartu1006.12100259reverse complement
CNT30352524Oryza glaberrimaEragrostis tef74.1345.8298.44192forward
CNT30154922Oryza glaberrimaPrunus persica10015.3396.14259forward
CNT3039583Oryza glaberrimaMarchantia polymorpha32.4320.7496.4384forward

Expression of CNT30552256

Sequence

>CNT30552256
GAGTATTTAGCCTTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCACGTGCCCCATGCTACTCGGGTCAGAGCGTAAGCTAGTGATGCTTTCGGCTA
CTGGACTTTAGCCATCTAGGGTGCGGCACTCAACCGCTTCGCCTAGCAGCACAACGCTTGTATTGCTCTCCCACAACCCCGTTTTCACGGTTTAGGCTGC
TCCCATTTCGCTCGCCGCTACTACGGGAATCGCTTTTGCTTTCTTTTCCTCTGGCTACT