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Detailed information on CNT30551547


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30378667Oryza brachyanthaArabidopsis thaliana96.283794.44414forward
CNT3019915Oryza brachyanthaCitrullus lanatus23.4929.6294.06101reverse complement
CNT30393404Oryza brachyanthaTriticum turgidum89.7732.9698.7386forward
CNT30627909Oryza brachyanthaDaucus carota95.5829.5394.65411forward
CNT30680683Oryza brachyanthaTriticum urartu35.1228.7198.01151forward
CNT30574572Oryza brachyanthaVitis vinifera96.286.1594.69414forward

Expression of CNT30551547

Peptides detected in this lncRNA

>peptide 1 (54 aa)
MESTVDVSDSTLSFVACIPICVATDSVSYVSGARKTAFGLPTLLMATFRPPNDL*

Sequence

>CNT30551547
GATGGTGTGGATATAACGGCGCGCAGTAACTGGGAGTCCTATTACACCTAAGGCCAACTTCCATTCACCAAACCCAGGTTCATCTCGTGTAGTGATTGTG
GACTCGTACAAGGATATGGAGTCGACGGTTGATGTATCAGACTCGACCCTGTCTTTCGTAGCATGCATTCCCATCTGTGTTGCAACTGATTCGGTAAGCT
ACGTGTCCGGTGCACGGAAAACTGCCTTCGGTCTCCCAACCTTACTCATGGCAACCTTCCGGCCGCCCAACGACCTATAACGCTAGTCACTACTCCCACT
GGGGCTAGGAAGTAAGCCCCACAACCCAAAGCGGCGAAGAACAAATAGAATTTGCTACAAAAGCCGGCTAACGGGGGTATTCCTGCGTATGAGAACATTG
TAATGGAGAAGGTCATAGCCAAAATAGTAT