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Detailed information on CNT30551244


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONOSAT000774, E-value = 6e-39

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3067785Oryza brachyanthaLeersia perrieri29.177.9987.7698forward

Expression of CNT30551244

Peptides detected in this lncRNA

>peptide 1 (52 aa)
VRIPGMSCASCVVTTLPGVARAVSDPFSCSLALARLVCPCGVVAPPDFVLCL*

Sequence

>CNT30551244
AGGTGAGGATTCCGGGTATGAGTTGTGCTTCTTGTGTGGTCACTACTCTGCCAGGGGTGGCAAGGGCAGTGAGTGATCCCTTCTCTTGCAGCTTGGCTCT
TGCCCGGTTGGTTTGCCCTTGTGGGGTTGTGGCACCGCCGGATTTTGTTTTATGCTTATGAGCTTTATTTGAGTCTTCCGCTGCTACTCATTTTGTGTAT
GTTGGGGCCTTGGACCCTATGTTGTATTAATTGCTTACGATGAAAATGTGAGGCTAGTCACATTCCTGGGGACTAGCTAAGCATGAGTGACAGATTTTGA
TCGCTTGTGATAATCGGGGATAGCGCTTTAGATCGA