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Detailed information on CNT30551189


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696895Oryza brachyanthaOryza sativa26.4927.6892.79111forward
CNT30575220Oryza brachyanthaOryza barthii47.2612.3186.36198forward

Expression of CNT30551189

Peptides detected in this lncRNA

>peptide 1 (45 aa)
GSCPPPPACWGTPRDGAELEQALMMIRPRRRRRLHVEEHDRHVYA*

>peptide 2 (37 aa)
MSQHDAMSPHGVRTFTGCYSWKQSPEEMNYCLNFVVF*

>peptide 3 (31 aa)
MLLGLNLRCIRNWIVFGGLKFNGLCFDLIVG*

Sequence

>CNT30551189
GTGGTAGTTGTCCACCTCCACCAGCTTGCTGGGGCACACCACGAGATGGCGCCGAACTCGAGCAGGCGCTGATGATGATCCGACCGAGACGCCGTCGTCG
TCTCCACGTCGAAGAACACGATCGCCATGTGTACGCATGATGCTTGTCTATGAGTCAGCATGACGCAATGAGTCCGCATGGTGTTCGTACATTTACAGGT
TGCTACTCTTGGAAGCAGTCACCAGAAGAGATGAACTATTGTTTGAACTTTGTTGTATTCTGATTGTATCTGTTATTAATTAAATCTGAGATAGTATATG
TTATTAGGTTTGAATCTGAGATGTATAAGAAATTGGATTGTGTTTGGTGGACTCAAATTTAATGGCCTGTGCTTTGATCTGATAGTTGGTTGATAAAATG
AGGCAATTCTGAAATGAGC