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Detailed information on CNT30551158


BLAST search results

BLAST vs Swiss-Prot:
sp|P16148|PLZ12_LUPPO, E-value = 1e-11

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693652Oryza brachyanthaOryza sativa36.1324.9394.1986forward
CNT30521034Oryza brachyanthaSetaria italica28.5719.2186.7668forward
CNT30471513Oryza brachyanthaSaccharum spontaneum33.6119.429080forward
CNT30370230Oryza brachyanthaOryza glumipatula36.1317.0694.1986forward
CNT30101718Oryza brachyanthaOryza rufipogon36.1314.9394.1986forward

Expression of CNT30551158

Peptides detected in this lncRNA

>peptide 1 (39 aa)
ARSPRTPARCPSGHPRLPDAASRCPAPTVSARSRTRKRT*

>peptide 2 (75 aa)
HVHREPQHAVPQAIHDCLTLPRDAQPRQCLHDLEPVSGHSLLQLILHSLCYIVLLLKSVVQVQLWNACPDHCRHQ*

Sequence

>CNT30551158
GGCACGTTCACCGAGAACCCCAGCACGCTGTCCCTCAGGCCATCCACGATTGCCTGACGCTGCCTCGCGATGCCCAGCCCCGACAGTGTCTGCACGATCT
CGAACCCGTAAGCGGACATAGCCTTCTCCAGCTCATCCTCCACAGCCTTTGCTATATCGTTCTTCTGCTCAAAAGCGTCGTCCAGGTTCAGCTTTGGAAC
GCTTGCCCTGATCACTGCCGACACCAATAGCACCACCA