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Detailed information on CNT30551087


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONMEST004927, E-value = 1e-24

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30678664Oryza brachyanthaSetaria viridis84.2367.1197.21251forward
CNT30524663Oryza brachyanthaSetaria italica78.5240.2199.15234reverse complement
CNT30641718Oryza brachyanthaNymphaea colorata72.4839.9392.13216reverse complement
CNT30549212Oryza brachyanthaIpomoea triloba101.019.9887.71301reverse complement
CNT30730494Oryza brachyanthaCorchorus capsularis101.0134.286.71301reverse complement
CNT30195089Oryza brachyanthaPisum sativum52.689.0392.99157forward
CNT30294119Oryza brachyanthaTriticum aestivum88.9397.0789.43265forward
CNT30220801Oryza brachyanthaHordeum vulgare66.7851.2998.99199reverse complement
CNT30391333Oryza brachyanthaTriticum turgidum93.6246.598.21279forward
CNT30569398Oryza brachyanthaActinidia chinensis101.0115.488.04301reverse complement
CNT30552690Oryza brachyanthaOryza glaberrima104.3620.3191.32311reverse complement
CNT30442196Oryza brachyanthaAegilops tauschii107.0537.6291.85319forward
CNT30660220Oryza brachyanthaTriticum dicoccoides107.0594.191.22319forward
CNT303548Oryza brachyanthaZea mays107.0522.491.85319forward
CNT30215429Oryza brachyanthaHelianthus annuus101.0142.7688.04301reverse complement
CNT30688674Oryza brachyanthaTriticum urartu107.0524.2291.85319reverse complement
CNT30720843Oryza brachyanthaTriticum spelta39.2654.4297.44117reverse complement
CNT30347837Oryza brachyanthaEragrostis tef107.0541.3791.54319forward
CNT30363261Oryza brachyanthaSorghum bicolor78.5218.3899.15234reverse complement
CNT30620564Oryza brachyanthaCajanus cajan90.65.2287.41270forward
CNT30596724Oryza brachyanthaOryza meridionalis78.529.67100234forward
CNT30354697Oryza brachyanthaLactuca sativa24.510.3495.8973reverse complement
CNT30410880Oryza brachyanthaPapaver somniferum101.0133.2287.71301reverse complement
CNT30642274Oryza brachyanthaCannabis sativa44.6316.2893.98133forward
CNT3036965Oryza brachyanthaCucumis melo101.0141.3588.04301reverse complement
CNT30331560Oryza brachyanthaDioscorea rotundata59.0634.8596.02176reverse complement
CNT30104431Oryza brachyanthaOryza rufipogon10045.9997.65298forward
CNT30604015Oryza brachyanthaOryza punctata89.9355.4998.88268forward
CNT30174498Oryza brachyanthaVigna angularis72.4842.7792.13216reverse complement

Expression of CNT30551087

Peptides detected in this lncRNA

>peptide 1 (62 aa)
TLSYFHASVAPSPYGWRTRRCLGCATGGSREVGGESTHLGVGLLLICFQQLSSPHLATQRLP*

>peptide 2 (80 aa)
PYPISMLLSLHPRMGGEPVAVSAVLPEALGKSEERALILGWAYYLYAFSSYPLRTWLPSVYRRHDNWYTRGASFPVLSML*

>peptide 3 (49 aa)
MLSAVILSALGYPAFTVGTITGTPEVRPSRSSQCSNAHTGYGPNCLTMF*

Sequence

>CNT30551087
ACCTTATCCTATTTCCATGCTTCTGTCGCTCCATCCCCGTATGGGTGGAGAACCCGTCGCTGTCTCGGCTGTGCTACCGGAGGCTCTAGGGAAGTCGGAG
GAGAGAGCACTCATCTTGGGGTGGGCTTACTACTTATATGCTTTCAGCAGTTATCCTCTCCGCACTTGGCTACCCAGCGTTTACCGTAGGCACGATAACT
GGTACACCAGAGGTGCGTCCTTCCCGGTCCTCTCAATGCTCTAACGCCCACACCGGATATGGACCGAATTGTCTCACGATGTTCTGAACCCAGTTCAC