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Detailed information on CNT30550626


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONOSAT000196, E-value = 8e-109

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696398Oryza brachyanthaOryza sativa103.0762.7990.73302reverse complement
CNT30671914Oryza brachyanthaSetaria viridis103.0718.1691.72302reverse complement
CNT30516721Oryza brachyanthaJuglans regia21.163.5691.9462forward
CNT30730480Oryza brachyanthaCorchorus capsularis103.0724.1290.73302forward
CNT30157617Oryza brachyanthaPistacia vera41.9817.6595.12123reverse complement
CNT30181978Oryza brachyanthaSecale cereale103.0734.1691.39302forward
CNT30292836Oryza brachyanthaTriticum aestivum103.0728.9391.72302reverse complement
CNT30221603Oryza brachyanthaHordeum vulgare103.0725.0691.06302reverse complement
CNT30389404Oryza brachyanthaTriticum turgidum103.0720.8791.72302reverse complement
CNT30592527Oryza brachyanthaMusa acuminata38.5733.8385.84113reverse complement
CNT30234026Oryza brachyanthaBrassica oleracea51.8838.2990.79152forward
CNT30511493Oryza brachyanthaSolanum lycopersicum68.9422.690.1202forward
CNT30438073Oryza brachyanthaAegilops tauschii103.0737.191.39302reverse complement
CNT30258698Oryza brachyanthaAvena sativa94.5434.2889.53277forward
CNT3082633Oryza brachyanthaBrassica juncea28.3325.2398.883reverse complement
CNT30207637Oryza brachyanthaHelianthus annuus103.0715.4489.74302reverse complement
CNT30721163Oryza brachyanthaTriticum spelta103.0729.2991.06302reverse complement
CNT30363124Oryza brachyanthaSorghum bicolor76.4598.6884.38224reverse complement
CNT30596312Oryza brachyanthaOryza meridionalis46.0826.6897.04135forward
CNT30360996Oryza brachyanthaLactuca sativa103.0720.790.73302reverse complement
CNT30484157Oryza brachyanthaChara braunii22.183.9996.9265forward
CNT30434643Oryza brachyanthaPapaver somniferum10039.3887.03293reverse complement
CNT3056094Oryza brachyanthaAmborella trichopoda103.0713.9887.09302reverse complement
CNT30108930Oryza brachyanthaOryza longistaminata103.0712.9191.72302reverse complement
CNT30118490Oryza brachyanthaCitrus clementina23.8915.891.4370reverse complement
CNT3038420Oryza brachyanthaCucumis melo80.216.4688.94235reverse complement

Expression of CNT30550626

Peptides detected in this lncRNA

>peptide 1 (32 aa)
IRFLVTHVTILTSDISRSCHQKPFPIGRTSLY*

Sequence

>CNT30550626
CATAAGATTTCTCGTTACTCATGTCACCATTCTCACTTCTGATATCTCCAGGTCTTGTCACCAAAAACCTTTCCCGATTGGCAGAACGTCTCTCTACTGA
CACTTGAAAAAACAGTTTTTAAGGTCTCGTCGCTTCGGTGAATCACTTGAGCCCTGTCATGGAGCTAGACCAGTGAGGTATTACGCTTTCTTCAAAGGAT
GGCTGCTTCCAAGCGCACCTCCTGGTTGTCATCGCTCGATCACTTCCTTTTCCACTAAGTGATTGCTTAGGGACCTTAGCGTACGATCTGGGC