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Detailed information on CNT30550344


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691007Oryza brachyanthaOryza sativa96.663.5997.8227forward
CNT30677945Oryza brachyanthaSetaria viridis96.614.9896.92227reverse complement
CNT3021516Oryza brachyanthaCitrullus lanatus96.1712.2988.94226reverse complement
CNT30730658Oryza brachyanthaCorchorus capsularis95.7428.6689.33225reverse complement
CNT30198768Oryza brachyanthaPisum sativum36.617.3787.2186forward
CNT30492881Oryza brachyanthaOlea europaea31.4911.4787.8474reverse complement
CNT30502643Oryza brachyanthaNicotiana attenuata66.3812.0585.26156reverse complement
CNT3046220Oryza brachyanthaPrunus dulcis28.948.8191.1868forward
CNT3091171Oryza brachyanthaSolanum tuberosum24.268.4389.4757reverse complement
CNT30191576Oryza brachyanthaSecale cereale96.657.9197.36227forward
CNT30297822Oryza brachyanthaTriticum aestivum96.655.197.36227forward
CNT30543269Oryza brachyanthaBrassica napus94.897.5387.89223reverse complement
CNT30236625Oryza brachyanthaBrassica oleracea26.818.0490.4863reverse complement
CNT30173126Oryza brachyanthaTrifolium pratense26.384.3987.162forward
CNT3082974Oryza brachyanthaBrassica juncea83.423.0687.24196forward
CNT3017923Oryza brachyanthaZea mays68.5157.597.52161reverse complement
CNT30610477Oryza brachyanthaGossypium raimondii95.7433.1988225reverse complement
CNT30232463Oryza brachyanthaAnanas comosus28.5128.3998.5167forward
CNT30684722Oryza brachyanthaTriticum urartu96.621.2797.36227reverse complement
CNT30356763Oryza brachyanthaLactuca sativa79.5734.588.77187forward
CNT3056176Oryza brachyanthaAmborella trichopoda81.284.1181.15191reverse complement
CNT30319059Oryza brachyanthaAsparagus officinalis81.723.6291.67192reverse complement
CNT30150789Oryza brachyanthaBrachypodium distachyon96.1727.3696.02226reverse complement

Expression of CNT30550344

Peptides detected in this lncRNA

>peptide 1 (43 aa)
FCTFPVLLLPRVLCNRSDHIDISSTQHRSSKGSRTTHQSTKAS*

Sequence

>CNT30550344
TTTTGTACTTTCCCCGTTCTATTGCTACCGCGGGTCTTATGCAATCGATCGGATCATATAGATATCTCTTCAACACAACATAGGTCATCGAAAGGATCTC
GGACGACTCACCAAAGCACGAAAGCTAGTTAGAAAATGAATTCCTATTGGAAGAGTGCCTAACCGCATGGATAAGCTCACATTAACCCATCAATTTTGGA
TCCAATTCGGGATTTTTCTTGGGAAGTTTCGGTAT