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Detailed information on CNT30550261


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30568468Ipomoea trilobaActinidia chinensis79.2298.0296.97694forward
CNT30599379Ipomoea trilobaFraxinus excelsior52.0571.9298.25456forward
CNT30705838Ipomoea trilobaPrunus avium10052.9995.89876forward

Expression of CNT30550261

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MSGPGSTPGGALPSIPLSFSLATILPPEPKDFDFS*

>peptide 2 (44 aa)
MLSQLFVFHKSKNFTSDYEIRMPPTVPVNHYSDPEGQRNRTEIL*

>peptide 3 (32 aa)
MKYECPRLSLLIITPIPKANVIGPKSYNVIPC*

>peptide 4 (44 aa)
MKFQRLPGPVGQGYMLVEYISVARVRPRTSKGITDLLLPQTSAA*

Sequence

>CNT30550261
GGATCATTCAATCGGTAGGAGCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGTCAACGCGAGCTGATGACTCGCGCTTACTAGGAATTCCTCGTTGA
AGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTACCCGGGCCTGTCGGCCAAGGCTATATGCTCGTTGAATACATCAGTGTA
GCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGCGGCTTGAAAGGCCGTAGTCCCTCTAAGAAGCTGGCCGC
GGAGGGATACCTCCGCATAGCTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACC
ACCACCCATAGAATCTCGAAAGAGCTCTCAGTCTGTCAATCCTTACTATGTCTGGACCTGGCTCCACTCCTGGTGGTGCCCTTCCGTCAATTCCTTTAAG
TTTCAGCCTTGCGACCATACTCCCCCCGGAACCCAAAGACTTTGATTTCTCATAAGGTGCCGGCGGAGTCCTTAAAGCAACATCCGCCGATCCCTGGTCG
GCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGAGCCCCCAACTTTCGTTCTTGATTAATGAAAACATCCTTGGCAAATGCTTTCGCAG
TTGTTCGTCTTTCATAAATCCAAGAATTTCACCTCTGACTATGAAATACGAATGCCCCCGACTGTCCCTGTTAATCATTACTCCGATCCCGAAGGCCAAC
GTAATAGGACCGAAATCCTATAATGTTATCCCATGCTAATGTATACAGAGCGTAGGCTTGCTTTGAGCACTCTAAT