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Detailed information on CNT30550233


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30639988Ipomoea trilobaNymphaea colorata58.7848.4295.171657reverse complement
CNT30531823Ipomoea trilobaEucalyptus grandis90.9579.8394.772564forward
CNT30519036Ipomoea trilobaJuglans regia67.2661.3295.681896forward
CNT30619307Ipomoea trilobaSesamum indicum52.6888.6694.881485forward
CNT30283167Ipomoea trilobaChenopodium quinoa67.2273.6595.361895forward
CNT3021656Ipomoea trilobaCitrullus lanatus67.2931.3396.051897forward
CNT30730489Ipomoea trilobaCorchorus capsularis43.92100.2495.721238forward
CNT30632318Ipomoea trilobaVigna unguiculata67.1252.8694.561892forward
CNT30195048Ipomoea trilobaPisum sativum61.6546.2195.81738forward
CNT30507933Ipomoea trilobaNicotiana attenuata67.1993.1697.521894forward
CNT30711221Ipomoea trilobaGlycine max47.9298.997.191351forward
CNT3047210Ipomoea trilobaPrunus dulcis60.0952.6695.931694forward
CNT30163337Ipomoea trilobaPistacia vera49.110095.31384forward
CNT30383013Ipomoea trilobaTriticum turgidum58.7462.493.61656forward
CNT30545324Ipomoea trilobaBrassica napus61.76100.2993.81741reverse complement
CNT30311297Ipomoea trilobaCamelina sativa66.9793.7493.171888forward
CNT3060563Ipomoea trilobaArabidopsis lyrata66.5185.5894.771875reverse complement
CNT3075807Ipomoea trilobaBrassica juncea67.3393.2793.841898forward
CNT30217525Ipomoea trilobaKalanchoe fedtschenkoi62.4798.1691.371761forward
CNT30355986Ipomoea trilobaLactuca sativa58.560.492.061649forward
CNT30434045Ipomoea trilobaPapaver somniferum67.2264.593.771895forward
CNT30574469Ipomoea trilobaVitis vinifera50.878.1295.531432forward
CNT3023562Ipomoea trilobaPopulus trichocarpa67.0184.6395.551889reverse complement
CNT3035495Ipomoea trilobaCucumis melo65.0634.8295.911834forward
CNT30496898Ipomoea trilobaDigitaria exilis53.3583.1492.421504forward
CNT30558388Ipomoea trilobaPanicum hallii46.6894.7495.291316forward
CNT30335982Ipomoea trilobaCynara cardunculus66.957.4690.31886reverse complement

Expression of CNT30550233

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MNRKPGYGAQLRANLDPTKGVGRLRQQDGGHGSRNPLRSV*

>peptide 2 (55 aa)
MPRHLISDAHEWINEIPTVPVYYPAKPQPRERAWQNQRGKKTLLSLTLVRLCEMT*

>peptide 3 (87 aa)
MEQCRQGKSAKWIRNFGKRIGSEGWARGSQSRTRRLFGGLLELLPRRERVAACRPGDGLGTAPSGAFPGRRTANSELVRTRGIRLFN*

>peptide 4 (39 aa)
TKNGPLGAVDSEARSTKQPRRPTYLKFENRSGALRPRCL*

>peptide 5 (34 aa)
MNGLTRFPLSLSTIQRNHSQGNGLGRISGERRPC*

Sequence

>CNT30550233
TACCAAAAATGGCCCACTTGGAGCTGTTGATTCCGAGGCGCGGTCAACGAAGCAGCCGCGCCGTCCTACCTATTTAAAGTTTGAGAATAGGTCGGGGGCG
TTACGCCCCCGATGCCTCTAATCATTGGCTTTACCCGATAGAACTCTCGCGCCAGCTCCAGCTATCCTGAGGGAAACTTCGGAGGGAACCAGCTACTAGA
CGGTTCGATTAGTCTTTCGCCCCTATACCCAAGTCAGACGAACGATTTGCACGTCAGGGCGAAAGACTAATCGAACCGTCTAGTAGCTGGTTCCCTCCGA
AGTTTCCCTCAGGATAGCTGGAGCTGGCGCGAGAGTTCTATCGGGTAAAGCCAATGATTAGAGGCATCGGGGGCGTAACGCCCTCGACCTATTCTCAAAC
TTTAAATAGGTAGGACGGCGCGGCTGCTTCGTTGAGCCGCGCCTCGGAATCAACAGCTCCAAGTGGGCCATTTTTGGTAAGCAGAACTGGCGATGCGGGA
TGAACCGGAAGCCGGGTTACGGTGCCCAACTGCGCGCTAACCTAGATCCCACAAAGGGTGTTGGTCGATTAAGACAGCAGGACGGTGGTCATGGAAGTCG
AAATCCGCTAAGGAGTGTGTAACAACTCACCTGCCGAATCAACTAGCCCCGAAAATGGATGGCGCTTAAGCGCGCGACCTATACCCGGCCGTCGGGGCAA
GAGCTAGGCCCCGATGAGTAGGAGGGCGCGGCGGTCGCTGCAAAACCTTGGGCGCGAGCCCGGGCGGAGCGGCCGTCGGTGCAGATCTTGGTGGTAGTAG
CAAATATTCAAATGAGAACTTTGAAGGCCGAAGAGGGGAAAGGTTCCATGTGAACGGCACTTGCACATGGGTTAGTCGATCCTAAGGGTCGGGGGAAGCC
CGACAGACAGCGCGTTTCGCGCGTGCGCCGAAGAGGGGAAAGGTTCCATGTGAACGGCACTTGCACATGGGTTAGTCGATCCTAAGGGTCGGGGGAAGCC
CGACAGACAGCGCGTTTCGCGCGTGCGCCGAAAGGGAATCGGGTTAAAATTCCTGAACCGGGACGTGGCGGTTGACGGCAACGTTAGGGAGTCCGGAGAC
GTCGGCGGGGGCCTCGGGAAGAGTTATCTTTTCTGTTTAACAGCCTGCCCACCCTGGAAACGGCTCAGCCGGAGGTAGGGTCCAGCGGCTGGAAGAGCAC
CGCACGTCGCGTGGTGTCCGGTGCGCCCCCGGCGGCCCTTGAAAATCCGGAGGACCGAGTGCCGTCCACGCCCGGTCGTACTCATAACCGCATCAGGTCT
CCAAGGTGAACAGCCTCTGGCCAATGGAACAATGTAGGCAAGGGAAGTCGGCAAAATGGATCCGTAACTTCGGGAAAAGGATTGGCTCTGAGGGCTGGGC
ACGGGGGTCCCAGTCCCGAACCCGTCGGCTGTTCGGCGGACTGCTCGAGCTGCTTCCGCGGCGAGAGCGGGTCGCCGCGTGCCGGCCGGGGGACGGACTG
GGAACGGCTCCTTCGGGGGCCTTCCCCGGGCGTCGAACAGCCAACTCAGAACTGGTACGGACAAGGGGAATCCGACTGTTTAATTAAAACAAAGCATTGC
GATGGTCCCTGCGGATGCTAACGCAATGTGATTTCTGCCCAGTGCTCTGAATGTCAAAGTGAAGAAATTCAACCAAGCGCGGGTAAACGGCGGGAGTAAC
TATGACTCTCTTAAGGTAGCCAAATGCCTCGTCATCTAATTAGTGACGCGCATGAATGGATTAACGAGATTCCCACTGTCCCTGTCTACTATCCAGCGAA
ACCACAGCCAAGGGAACGGGCTTGGCAGAATCAGCGGGGAAAGAAGACCCTGTTGAGCTTGACTCTAGTCCGACTTTGTGAAATGACTTGAGAGGTGTAG
GATAAGTGGGAGCCGAAAGGCGAAAGTGAAATACCACTACTTTTAACGTTATTTTACTTATTCCGTGAATCGGAGGCGGGGCATTGCCCCTCTTTTTGGA
CCCAAGGCTCGCTCGCGGGCCGATCCGGGCGGAAGACATTGTCAGGTGGGGAGTTTGGCTGGGGCGGCACATCTGTTAAAAGATAACGCAGGTGTCCTAA
GATGAGCTCAACGAGAACAGAAATCTCGTGTGGAACAGAAGGGTAAAAGCTCGTTTGATTCTGATTTCCAGTACGAATACGAACCGTGAAAGCGTGGCCT
AACGATCCTTTAGACCTTCGGAATTCGAAGCTAGAGGTGTCAGAAAAGTTACCACAGGGATAACTGGCTTGTGGCAGCCAAGCGTTCATAGCGACGTTGC
TTTTTGATCCTTCGATGTCGGCTCTTCCTATCATTGTGAAGCAGAATTCACCAAGTGTTGGATTGTTCACCCACCAATAGGGAACGTGAGCTGGGTTTAG
ACCGTCGTGAGACAGGTTAGTTTTACCCTACTGATGACAGTGTCGCAATAGTAATTCAACCTAGTACGAGAGGAACCGTTGATTCGCACAATTGGTCATC
GCGCTTGGTTGAAAAGCCAGTGGCGCGAAGCTACCGTGCGTTGGATTATGACTGAACGCCTCTAAGTCAGAATCCGGGCTAGACCGACGCATGCGCTCGC
CGTCCGTTTGCCGACCCGCAGTAGGGGCCATTTGGCCCCCAAGGGCACGTGTCGTTGGCTAAGCCGTCGTGGCAGAAGGGTCGCGGCGGCCGCCTTGAAT
TACAATTCCGATCGAGCGGTGAGCTGAATCCTTTGCAGACGACTTAAATACGCGACGGGGTATTGTAAGGGGTAGAGTGGCCTTGCTGCCACGATCCTCT
GAGATTCAGCCCTTTGTCG